Application of Lacunarity for Quantification of Single Molecule Localization Microscopy Images

The quantitative analysis of datasets achieved by single molecule localization microscopy is vital for studying the structure of subcellular organizations. Cluster analysis has emerged as a multi-faceted tool in the structural analysis of localization datasets. However, the results it produces great...

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Bibliographic Details
Main Authors: Bálint Barna H. Kovács, Dániel Varga, Dániel Sebők, Hajnalka Majoros, Róbert Polanek, Tibor Pankotai, Katalin Hideghéty, Ákos Kukovecz, Miklós Erdélyi
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Cells
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Online Access:https://www.mdpi.com/2073-4409/11/19/3105
Description
Summary:The quantitative analysis of datasets achieved by single molecule localization microscopy is vital for studying the structure of subcellular organizations. Cluster analysis has emerged as a multi-faceted tool in the structural analysis of localization datasets. However, the results it produces greatly depend on the set parameters, and the process can be computationally intensive. Here we present a new approach for structural analysis using lacunarity. Unlike cluster analysis, lacunarity can be calculated quickly while providing definitive information about the structure of the localizations. Using simulated data, we demonstrate how lacunarity results can be interpreted. We use these interpretations to compare our lacunarity analysis with our previous cluster analysis-based results in the field of DNA repair, showing the new algorithm’s efficiency.
ISSN:2073-4409