The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae)
Chimonobambusa purpurea is one of the important bamboo species in southwest of China. We studied the complete chloroplast (cp) genome of C. purpurea in this study. The cp genome of C. purpurea (GenBank accession: MW030500) was 139,574 bp in length, including a large single-copy (LSC) region of 83,17...
| Main Authors: | , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2021-02-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1882897 |
| _version_ | 1827772577154596864 |
|---|---|
| author | Wei Liu Jun Zhang Yun-Ke Liu Qian-Ying Huang Qian-Gang Xiao Bao-Xin Wang |
| author_facet | Wei Liu Jun Zhang Yun-Ke Liu Qian-Ying Huang Qian-Gang Xiao Bao-Xin Wang |
| author_sort | Wei Liu |
| collection | DOAJ |
| description | Chimonobambusa purpurea is one of the important bamboo species in southwest of China. We studied the complete chloroplast (cp) genome of C. purpurea in this study. The cp genome of C. purpurea (GenBank accession: MW030500) was 139,574 bp in length, including a large single-copy (LSC) region of 83,171 bp, a small single-copy (SSC) region of 12,811 bp, and a pair of inverted repeated (IR) regions of 21,796 bp. And the genome contained 133 genes, including 86 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Based on 30 cp genomes, we used the phylogenetic analysis to build phylogenetic tree, indicating that C. purpurea is closely related to C. tumidissinoda. |
| first_indexed | 2024-03-11T13:11:10Z |
| format | Article |
| id | doaj.art-f4b80b337f8445a382bd0ac512c8cd5a |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:10Z |
| publishDate | 2021-02-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f4b80b337f8445a382bd0ac512c8cd5a2023-11-03T14:08:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-02-016269169210.1080/23802359.2021.18828971882897The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae)Wei Liu0Jun Zhang1Yun-Ke Liu2Qian-Ying Huang3Qian-Gang Xiao4Bao-Xin Wang5Chengdu Academy of Agricultural and Forestry SciencesChengdu Academy of Agricultural and Forestry SciencesChengdu Academy of Agricultural and Forestry SciencesChengdu Academy of Agricultural and Forestry SciencesChengdu Academy of Agricultural and Forestry SciencesChengdu Academy of Agricultural and Forestry SciencesChimonobambusa purpurea is one of the important bamboo species in southwest of China. We studied the complete chloroplast (cp) genome of C. purpurea in this study. The cp genome of C. purpurea (GenBank accession: MW030500) was 139,574 bp in length, including a large single-copy (LSC) region of 83,171 bp, a small single-copy (SSC) region of 12,811 bp, and a pair of inverted repeated (IR) regions of 21,796 bp. And the genome contained 133 genes, including 86 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Based on 30 cp genomes, we used the phylogenetic analysis to build phylogenetic tree, indicating that C. purpurea is closely related to C. tumidissinoda.http://dx.doi.org/10.1080/23802359.2021.1882897chimonobambusa purpureachloroplast genomephylogenetic analysis |
| spellingShingle | Wei Liu Jun Zhang Yun-Ke Liu Qian-Ying Huang Qian-Gang Xiao Bao-Xin Wang The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae) Mitochondrial DNA. Part B. Resources chimonobambusa purpurea chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae) |
| title_full | The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae) |
| title_fullStr | The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae) |
| title_full_unstemmed | The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae) |
| title_short | The complete chloroplast genome of Chimonobambusa purpurea (Bambusatae) |
| title_sort | complete chloroplast genome of chimonobambusa purpurea bambusatae |
| topic | chimonobambusa purpurea chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1882897 |
| work_keys_str_mv | AT weiliu thecompletechloroplastgenomeofchimonobambusapurpureabambusatae AT junzhang thecompletechloroplastgenomeofchimonobambusapurpureabambusatae AT yunkeliu thecompletechloroplastgenomeofchimonobambusapurpureabambusatae AT qianyinghuang thecompletechloroplastgenomeofchimonobambusapurpureabambusatae AT qiangangxiao thecompletechloroplastgenomeofchimonobambusapurpureabambusatae AT baoxinwang thecompletechloroplastgenomeofchimonobambusapurpureabambusatae AT weiliu completechloroplastgenomeofchimonobambusapurpureabambusatae AT junzhang completechloroplastgenomeofchimonobambusapurpureabambusatae AT yunkeliu completechloroplastgenomeofchimonobambusapurpureabambusatae AT qianyinghuang completechloroplastgenomeofchimonobambusapurpureabambusatae AT qiangangxiao completechloroplastgenomeofchimonobambusapurpureabambusatae AT baoxinwang completechloroplastgenomeofchimonobambusapurpureabambusatae |