The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant
Clerodendrum japonicum (Thunb.) sweet, a member of Verbenaceae, is a traditional Chinese medicinal plant mainly distributed in tropical and subtropical Asia. Herein, we reported the complete chloroplast genome sequence of C. japonicum. The size of the chloroplast genome is 152,171 bp in length, incl...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1885316 |
| _version_ | 1797638978723119104 |
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| author | Xiaofei Long Yan Pan Yuhao Weng Zhaodong Hao Daiquan Ye Yunfei You Jinhui Chen Jisen Shi |
| author_facet | Xiaofei Long Yan Pan Yuhao Weng Zhaodong Hao Daiquan Ye Yunfei You Jinhui Chen Jisen Shi |
| author_sort | Xiaofei Long |
| collection | DOAJ |
| description | Clerodendrum japonicum (Thunb.) sweet, a member of Verbenaceae, is a traditional Chinese medicinal plant mainly distributed in tropical and subtropical Asia. Herein, we reported the complete chloroplast genome sequence of C. japonicum. The size of the chloroplast genome is 152,171 bp in length, including a large single-copy region (LSC) of 83,415 bp, a small single-copy region (SSC) of 17,318 bp, which was separated by a pair of inverted repeated regions of 25,719 bp. The C. japonicum chloroplast genome encodes 133 genes, including 88 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that C. japonicum is closely related to C. mandarinorum and C. yunnanense. |
| first_indexed | 2024-03-11T13:11:10Z |
| format | Article |
| id | doaj.art-f4cf6d0efa224fca85e54acb2988a565 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:10Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f4cf6d0efa224fca85e54acb2988a5652023-11-03T14:08:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-016385185210.1080/23802359.2021.18853161885316The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plantXiaofei Long0Yan Pan1Yuhao Weng2Zhaodong Hao3Daiquan Ye4Yunfei You5Jinhui Chen6Jisen Shi7Key Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry UniversityKey Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry UniversityKey Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry UniversityKey Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry UniversityNational Germplasm Bank of Chinese fir at Fujian Yangkou Forest FarmNational Germplasm Bank of Chinese fir at Fujian Yangkou Forest FarmKey Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry UniversityKey Laboratory of Forest Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry UniversityClerodendrum japonicum (Thunb.) sweet, a member of Verbenaceae, is a traditional Chinese medicinal plant mainly distributed in tropical and subtropical Asia. Herein, we reported the complete chloroplast genome sequence of C. japonicum. The size of the chloroplast genome is 152,171 bp in length, including a large single-copy region (LSC) of 83,415 bp, a small single-copy region (SSC) of 17,318 bp, which was separated by a pair of inverted repeated regions of 25,719 bp. The C. japonicum chloroplast genome encodes 133 genes, including 88 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic tree showed that C. japonicum is closely related to C. mandarinorum and C. yunnanense.http://dx.doi.org/10.1080/23802359.2021.1885316chloroplast genomeclerodendrum japonicum |
| spellingShingle | Xiaofei Long Yan Pan Yuhao Weng Zhaodong Hao Daiquan Ye Yunfei You Jinhui Chen Jisen Shi The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant Mitochondrial DNA. Part B. Resources chloroplast genome clerodendrum japonicum |
| title | The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant |
| title_full | The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant |
| title_fullStr | The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant |
| title_full_unstemmed | The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant |
| title_short | The complete chloroplast genome of Clerodendrum japonicum (Thunb.) Sweet, a traditional Chinese medicinal plant |
| title_sort | complete chloroplast genome of clerodendrum japonicum thunb sweet a traditional chinese medicinal plant |
| topic | chloroplast genome clerodendrum japonicum |
| url | http://dx.doi.org/10.1080/23802359.2021.1885316 |
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