The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)
Histiopteris incisa is a core member to address the issue of relationship between Histiopteris and Pteris. Its complete chloroplast genome was generated by de novo assembly using Illumina sequencing. The complete chloroplast genome is a quadripartite structure of 16,0567 bp in length, with two inver...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1491344 |
| _version_ | 1797640653460471808 |
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| author | Xinyao Sun Ziqi Kang Shanshan Liu Ruixiang Xu Zhen Wang Ting Wang Yingjuan Su |
| author_facet | Xinyao Sun Ziqi Kang Shanshan Liu Ruixiang Xu Zhen Wang Ting Wang Yingjuan Su |
| author_sort | Xinyao Sun |
| collection | DOAJ |
| description | Histiopteris incisa is a core member to address the issue of relationship between Histiopteris and Pteris. Its complete chloroplast genome was generated by de novo assembly using Illumina sequencing. The complete chloroplast genome is a quadripartite structure of 16,0567 bp in length, with two inverted repeat regions (IRs) of 27,119 bp each, a large single-copy (LSC) region of 84,897 bp and a small single-copy (SSC) region of 21,432 bp. A total of 132 genes were predicted, involving in 88 protein-coding genes, eight rRNA genes, 35 tRNA genes, and one pseudogene. ML phylogenetic analysis showed that H. incisa was closely related to Pteridium aquilinum subsp. aquilinum. |
| first_indexed | 2024-03-11T13:34:56Z |
| format | Article |
| id | doaj.art-f5bb84436db64b7d85dd4560baa7b77f |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:56Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f5bb84436db64b7d85dd4560baa7b77f2023-11-02T15:57:24ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013277277310.1080/23802359.2018.14913441491344The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae)Xinyao Sun0Ziqi Kang1Shanshan Liu2Ruixiang Xu3Zhen Wang4Ting Wang5Yingjuan Su6Sun Yat-sen UniversitySun Yat-sen UniversitySun Yat-sen UniversitySun Yat-sen UniversityNanjing Agricultural UniversitySouth China Agricultural UniversitySun Yat-sen UniversityHistiopteris incisa is a core member to address the issue of relationship between Histiopteris and Pteris. Its complete chloroplast genome was generated by de novo assembly using Illumina sequencing. The complete chloroplast genome is a quadripartite structure of 16,0567 bp in length, with two inverted repeat regions (IRs) of 27,119 bp each, a large single-copy (LSC) region of 84,897 bp and a small single-copy (SSC) region of 21,432 bp. A total of 132 genes were predicted, involving in 88 protein-coding genes, eight rRNA genes, 35 tRNA genes, and one pseudogene. ML phylogenetic analysis showed that H. incisa was closely related to Pteridium aquilinum subsp. aquilinum.http://dx.doi.org/10.1080/23802359.2018.1491344histiopteris incisachloroplast genomephylogenetic analysis |
| spellingShingle | Xinyao Sun Ziqi Kang Shanshan Liu Ruixiang Xu Zhen Wang Ting Wang Yingjuan Su The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) Mitochondrial DNA. Part B. Resources histiopteris incisa chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) |
| title_full | The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) |
| title_fullStr | The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) |
| title_full_unstemmed | The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) |
| title_short | The complete chloroplast genome sequence of Histiopteris incisa (Dennstaedtiaceae) |
| title_sort | complete chloroplast genome sequence of histiopteris incisa dennstaedtiaceae |
| topic | histiopteris incisa chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2018.1491344 |
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