Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome
Whole mitochondrial DNA (mtDNA) of S.esocinusand S. plagiostomus was found to be 16,591 and 16,564 bp respectively with 13 protein-coding genes, 2 rRNAs genes, 22 tRNA genes and 2 non-coding region. For valuing the phylogenetic relationship of a species on the basis of whole mitogenome are considere...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1827996 |
| _version_ | 1797639115137613824 |
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| author | Aqsa Rehman Muhammad Fiaz Khan Saira Bibi Faisal Nouroz |
| author_facet | Aqsa Rehman Muhammad Fiaz Khan Saira Bibi Faisal Nouroz |
| author_sort | Aqsa Rehman |
| collection | DOAJ |
| description | Whole mitochondrial DNA (mtDNA) of S.esocinusand S. plagiostomus was found to be 16,591 and 16,564 bp respectively with 13 protein-coding genes, 2 rRNAs genes, 22 tRNA genes and 2 non-coding region. For valuing the phylogenetic relationship of a species on the basis of whole mitogenome are considered to be a great importance. In this study, we sequenced whole mitogenome of S.esocinusand S. plagiostomus and compared with the whole mitogenome sequences of members of other families (Balitoridae, Nemanchillidae and Cobatidae). The monophyly of the family Cyprinidae and a clade comprising Balitoridae and Nemanchillidae while Cobatidae with paraphyletic origin was strongly supported by the resultant phylogenies, recognized that Cyprinidae was closely related with the family Cobatidae than other ones. The results indicated that whole mitochondrial genome has a great importance in studying variation in genes and phylogenetic relationship in the subfamily Schizothoracinae. This data offering the molecular phylogenetic frame work of important Schizothorax species found in Swat. |
| first_indexed | 2024-03-11T13:12:10Z |
| format | Article |
| id | doaj.art-f6195dddcd6049b0ab1390c04fd13e8c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:10Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f6195dddcd6049b0ab1390c04fd13e8c2023-11-03T14:08:15ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533672367510.1080/23802359.2020.18279961827996Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genomeAqsa Rehman0Muhammad Fiaz Khan1Saira Bibi2Faisal Nouroz3Department of Zoology, Hazara UniversityDepartment of Zoology, Hazara UniversityDepartment of Zoology, Hazara UniversityDepartment of Bioinformatics, Hazara UniversityWhole mitochondrial DNA (mtDNA) of S.esocinusand S. plagiostomus was found to be 16,591 and 16,564 bp respectively with 13 protein-coding genes, 2 rRNAs genes, 22 tRNA genes and 2 non-coding region. For valuing the phylogenetic relationship of a species on the basis of whole mitogenome are considered to be a great importance. In this study, we sequenced whole mitogenome of S.esocinusand S. plagiostomus and compared with the whole mitogenome sequences of members of other families (Balitoridae, Nemanchillidae and Cobatidae). The monophyly of the family Cyprinidae and a clade comprising Balitoridae and Nemanchillidae while Cobatidae with paraphyletic origin was strongly supported by the resultant phylogenies, recognized that Cyprinidae was closely related with the family Cobatidae than other ones. The results indicated that whole mitochondrial genome has a great importance in studying variation in genes and phylogenetic relationship in the subfamily Schizothoracinae. This data offering the molecular phylogenetic frame work of important Schizothorax species found in Swat.http://dx.doi.org/10.1080/23802359.2020.1827996phylogenetic associationsnow troutmitochondrial dna |
| spellingShingle | Aqsa Rehman Muhammad Fiaz Khan Saira Bibi Faisal Nouroz Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome Mitochondrial DNA. Part B. Resources phylogenetic association snow trout mitochondrial dna |
| title | Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome |
| title_full | Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome |
| title_fullStr | Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome |
| title_full_unstemmed | Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome |
| title_short | Phylogenetic association of Cyprinid (Schizothorax) inferred from complete mitochondrial genome |
| title_sort | phylogenetic association of cyprinid schizothorax inferred from complete mitochondrial genome |
| topic | phylogenetic association snow trout mitochondrial dna |
| url | http://dx.doi.org/10.1080/23802359.2020.1827996 |
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