The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia
Objective: This study describes the newest deoxyribonucleic acid (DNA) barcoding Asian redtail catfish (Hemibagrus nemurus) in the Progo River, Magelang, Central Java, Indonesia. Materials and Methods: Ten fish were caught in the Progo River, Magelang, Central Java, Indonesia. The polymerase chain...
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| Format: | Article |
| Language: | English |
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Network for the Veterinarians of Bangladesh
2022-12-01
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| Series: | Journal of Advanced Veterinary and Animal Research |
| Subjects: | |
| Online Access: | http://www.ejmanager.com/fulltextpdf.php?mno=97363 |
| _version_ | 1797957200830791680 |
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| author | Desyiamililia Yuanawati Hutama Satriana Farizky Muhammad Browijoyo Santanumurti Mamdoh T. Jamal Lalu M. Iqbal Sani Hawis Madduppa Putri Desi Wulan Sari |
| author_facet | Desyiamililia Yuanawati Hutama Satriana Farizky Muhammad Browijoyo Santanumurti Mamdoh T. Jamal Lalu M. Iqbal Sani Hawis Madduppa Putri Desi Wulan Sari |
| author_sort | Desyiamililia Yuanawati |
| collection | DOAJ |
| description | Objective: This study describes the newest deoxyribonucleic acid (DNA) barcoding Asian redtail catfish (Hemibagrus nemurus) in the Progo River, Magelang, Central Java, Indonesia.
Materials and Methods: Ten fish were caught in the Progo River, Magelang, Central Java, Indonesia. The polymerase chain reaction was the molecular diagnosis to detect the sequences of DNA of Cytochrome Oxidase I compared to National Center for Biotechnology Information data (GenBank).
Results: The results showed that the percent identity was not 100% with H. nemurus data from other locations (GenBank), including Indonesia. The closest percent identity was H. nemurus from Java Island (Accession ID: MK312566.1) with 97.6% similarity. The genetic mutation that hap¬pened might be due to environmental change (pollution) in the Progo River recently.
Conclusions: This study showed a genetic mutation in H. nemurus from Progo River may be caused by environmental change. Low pollution exposure levels may not be detrimental (lethal) to fish. However, it can affect fish fertility, which leads to population degradation (gene variation). Attention must be increased for fish survival in the future. [J Adv Vet Anim Res 2022; 9(4.000): 591-600] |
| first_indexed | 2024-04-11T00:01:43Z |
| format | Article |
| id | doaj.art-f6c24b84deee4f8f85a3aa5dc7ff9faf |
| institution | Directory Open Access Journal |
| issn | 2311-7710 |
| language | English |
| last_indexed | 2024-04-11T00:01:43Z |
| publishDate | 2022-12-01 |
| publisher | Network for the Veterinarians of Bangladesh |
| record_format | Article |
| series | Journal of Advanced Veterinary and Animal Research |
| spelling | doaj.art-f6c24b84deee4f8f85a3aa5dc7ff9faf2023-01-10T04:13:29ZengNetwork for the Veterinarians of BangladeshJournal of Advanced Veterinary and Animal Research2311-77102022-12-019459160010.5455/javar.2022.i62897363The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, IndonesiaDesyiamililia Yuanawati0Hutama Satriana Farizky1Muhammad Browijoyo Santanumurti2Mamdoh T. Jamal3Lalu M. Iqbal Sani4Hawis Madduppa5Putri Desi Wulan Sari6Program Study of Aquaculture, Faculty of Fisheries and Marine, Universitas Airlangga, Surabaya, Indonesia Program Study of Aquaculture, Faculty of Fisheries and Marine, Universitas Airlangga, Surabaya, Indonesia Department of Aquaculture, Faculty of Fisheries and Marine, Universitas Airlangga, Surabaya, Indonesia. & Department of Marine Biology, Faculty of Marine Sciences, King Abdulaziz University, Jeddah, Kingdom of Saudi Arabia Department of Marine Biology, Faculty of Marine Sciences, King Abdulaziz University, Jeddah, Kingdom of Saudi Arabia Oceanogen Environmental Biotechnology Laboklinikum, Cilendek Timur, Bogor, Indonesia Oceanogen Environmental Biotechnology Laboklinikum, Cilendek Timur, Bogor, Indonesia Department of Aquaculture, Faculty of Fisheries and Marine, Universitas Airlangga, Surabaya, Indonesia.Objective: This study describes the newest deoxyribonucleic acid (DNA) barcoding Asian redtail catfish (Hemibagrus nemurus) in the Progo River, Magelang, Central Java, Indonesia. Materials and Methods: Ten fish were caught in the Progo River, Magelang, Central Java, Indonesia. The polymerase chain reaction was the molecular diagnosis to detect the sequences of DNA of Cytochrome Oxidase I compared to National Center for Biotechnology Information data (GenBank). Results: The results showed that the percent identity was not 100% with H. nemurus data from other locations (GenBank), including Indonesia. The closest percent identity was H. nemurus from Java Island (Accession ID: MK312566.1) with 97.6% similarity. The genetic mutation that hap¬pened might be due to environmental change (pollution) in the Progo River recently. Conclusions: This study showed a genetic mutation in H. nemurus from Progo River may be caused by environmental change. Low pollution exposure levels may not be detrimental (lethal) to fish. However, it can affect fish fertility, which leads to population degradation (gene variation). Attention must be increased for fish survival in the future. [J Adv Vet Anim Res 2022; 9(4.000): 591-600]http://www.ejmanager.com/fulltextpdf.php?mno=97363dna barcoding; hemibagrus nemurus; indonesia; progo river |
| spellingShingle | Desyiamililia Yuanawati Hutama Satriana Farizky Muhammad Browijoyo Santanumurti Mamdoh T. Jamal Lalu M. Iqbal Sani Hawis Madduppa Putri Desi Wulan Sari The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia Journal of Advanced Veterinary and Animal Research dna barcoding; hemibagrus nemurus; indonesia; progo river |
| title | The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia |
| title_full | The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia |
| title_fullStr | The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia |
| title_full_unstemmed | The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia |
| title_short | The newest COI molecular detection of Asian redtail catfish Hemibagrus nemurus (Valenciennes, 1840) in Progo River, Magelang, Central Java, Indonesia |
| title_sort | newest coi molecular detection of asian redtail catfish hemibagrus nemurus valenciennes 1840 in progo river magelang central java indonesia |
| topic | dna barcoding; hemibagrus nemurus; indonesia; progo river |
| url | http://www.ejmanager.com/fulltextpdf.php?mno=97363 |
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