Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies

RNA-dependent RNA polymerases (RdRPs) represent a distinctive yet versatile class of nucleic acid polymerases encoded by RNA viruses for the replication and transcription of their genome. The structure of the RdRP is comparable to that of a cupped right hand consisting of fingers, palm, and thumb su...

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Main Authors: Kavitha Ramaswamy, Mariya Rashid, Selvarajan Ramasamy, Tamilselvan Jayavelu, Sangita Venkataraman
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/14/10/2200
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author Kavitha Ramaswamy
Mariya Rashid
Selvarajan Ramasamy
Tamilselvan Jayavelu
Sangita Venkataraman
author_facet Kavitha Ramaswamy
Mariya Rashid
Selvarajan Ramasamy
Tamilselvan Jayavelu
Sangita Venkataraman
author_sort Kavitha Ramaswamy
collection DOAJ
description RNA-dependent RNA polymerases (RdRPs) represent a distinctive yet versatile class of nucleic acid polymerases encoded by RNA viruses for the replication and transcription of their genome. The structure of the RdRP is comparable to that of a cupped right hand consisting of fingers, palm, and thumb subdomains. Despite the presence of a common structural core, the RdRPs differ significantly in the mechanistic details of RNA binding and polymerization. The present review aims at exploring these incongruities in light of recent structural studies of RdRP complexes with diverse cofactors, RNA moieties, analogs, and inhibitors.
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spelling doaj.art-f73f9ae8cb0945c78fa2d03a56108ed92023-11-24T03:09:14ZengMDPI AGViruses1999-49152022-10-011410220010.3390/v14102200Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural StudiesKavitha Ramaswamy0Mariya Rashid1Selvarajan Ramasamy2Tamilselvan Jayavelu3Sangita Venkataraman4Department of Biotechnology, Anna University, Sardar Patel Road, Guindy, Chennai 600025, IndiaTaiwan International Graduate Program, Molecular Cell Biology (National Defense Medical Center and Academia Sinica), Taipei 115, TaiwanNational Research Center for Banana, Somarasempettai−Thogaimalai Rd, Podavur, Tamil Nadu 639103, IndiaDepartment of Biotechnology, Anna University, Sardar Patel Road, Guindy, Chennai 600025, IndiaDepartment of Biotechnology, Anna University, Sardar Patel Road, Guindy, Chennai 600025, IndiaRNA-dependent RNA polymerases (RdRPs) represent a distinctive yet versatile class of nucleic acid polymerases encoded by RNA viruses for the replication and transcription of their genome. The structure of the RdRP is comparable to that of a cupped right hand consisting of fingers, palm, and thumb subdomains. Despite the presence of a common structural core, the RdRPs differ significantly in the mechanistic details of RNA binding and polymerization. The present review aims at exploring these incongruities in light of recent structural studies of RdRP complexes with diverse cofactors, RNA moieties, analogs, and inhibitors.https://www.mdpi.com/1999-4915/14/10/2200replicationpolymerasecofactorsstructureRNA virusesinhibitors
spellingShingle Kavitha Ramaswamy
Mariya Rashid
Selvarajan Ramasamy
Tamilselvan Jayavelu
Sangita Venkataraman
Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies
Viruses
replication
polymerase
cofactors
structure
RNA viruses
inhibitors
title Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies
title_full Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies
title_fullStr Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies
title_full_unstemmed Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies
title_short Revisiting Viral RNA-Dependent RNA Polymerases: Insights from Recent Structural Studies
title_sort revisiting viral rna dependent rna polymerases insights from recent structural studies
topic replication
polymerase
cofactors
structure
RNA viruses
inhibitors
url https://www.mdpi.com/1999-4915/14/10/2200
work_keys_str_mv AT kavitharamaswamy revisitingviralrnadependentrnapolymerasesinsightsfromrecentstructuralstudies
AT mariyarashid revisitingviralrnadependentrnapolymerasesinsightsfromrecentstructuralstudies
AT selvarajanramasamy revisitingviralrnadependentrnapolymerasesinsightsfromrecentstructuralstudies
AT tamilselvanjayavelu revisitingviralrnadependentrnapolymerasesinsightsfromrecentstructuralstudies
AT sangitavenkataraman revisitingviralrnadependentrnapolymerasesinsightsfromrecentstructuralstudies