Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome

The fat mass and obesity-associated gene ( FTO ) codes for a DNA/RNA demethylase. Pathological variants in this gene are rare, with only three reports in the literature, all with mutations in the catalytic domain. We report the first biallelic human variant in fat mass and obesity-associated gene (c...

Full description

Bibliographic Details
Main Authors: Naomi Mayman, Jiangbo Wei, Shangjun Cai, Rohan Soman, Hillary Raynes, Maite La Vega-Talbott, Chuan He, Thomas Naidich, G. Praveen Raju, Sathiji Kathiresu Nageshwaran
Format: Article
Language:English
Published: SAGE Publishing 2023-07-01
Series:SAGE Open Medical Case Reports
Online Access:https://doi.org/10.1177/2050313X231188883
_version_ 1827890916849876992
author Naomi Mayman
Jiangbo Wei
Shangjun Cai
Rohan Soman
Hillary Raynes
Maite La Vega-Talbott
Chuan He
Thomas Naidich
G. Praveen Raju
Sathiji Kathiresu Nageshwaran
author_facet Naomi Mayman
Jiangbo Wei
Shangjun Cai
Rohan Soman
Hillary Raynes
Maite La Vega-Talbott
Chuan He
Thomas Naidich
G. Praveen Raju
Sathiji Kathiresu Nageshwaran
author_sort Naomi Mayman
collection DOAJ
description The fat mass and obesity-associated gene ( FTO ) codes for a DNA/RNA demethylase. Pathological variants in this gene are rare, with only three reports in the literature, all with mutations in the catalytic domain. We report the first biallelic human variant in fat mass and obesity-associated gene (c.287G>C, p.Arg96Pro/R96P) outside the catalytic site, causing numerous abnormalities across multiple organ systems, affecting respiratory, cardiovascular, and neurological function. Biochemical assays of cells with the patient’s variant were performed to further quantify the effect of the variant on function. Loss-of-function resulting from the patient’s R96P missense variant was demonstrated with in vitro biochemical characterization of demethylase activity, resulting in a 90% reduction in function of the fat mass and obesity-associated protein compared to wild-type. Our findings demonstrate a novel fat mass and obesity-associated gene non-catalytic site variant with a unique patient phenotype of bilateral multifocal epilepsy and multisystem congenital anomalies.
first_indexed 2024-03-12T21:16:25Z
format Article
id doaj.art-f75930d2cefe4b9a8cd20f0a011b5c90
institution Directory Open Access Journal
issn 2050-313X
language English
last_indexed 2024-03-12T21:16:25Z
publishDate 2023-07-01
publisher SAGE Publishing
record_format Article
series SAGE Open Medical Case Reports
spelling doaj.art-f75930d2cefe4b9a8cd20f0a011b5c902023-07-29T09:03:41ZengSAGE PublishingSAGE Open Medical Case Reports2050-313X2023-07-011110.1177/2050313X231188883Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndromeNaomi Mayman0Jiangbo Wei1Shangjun Cai2Rohan Soman3Hillary Raynes4Maite La Vega-Talbott5Chuan He6Thomas Naidich7G. Praveen Raju8Sathiji Kathiresu Nageshwaran9Icahn School of Medicine at Mount Sinai, New York, NY, USADepartment of Chemistry, University of Chicago, IL, USADepartment of Chemistry, University of Chicago, IL, USAWeill Cornell/Rockefeller/Sloan Kettering MD/PhD Tri-institutional Program, New York, NY, USADepartment of Neurology, Mount Sinai, New York, NY, USADepartment of Neurology, Mount Sinai, New York, NY, USADepartment of Chemistry, University of Chicago, IL, USADepartment of Radiology, Mount Sinai, New York, NY, USADepartment of Neurology, Mount Sinai, New York, NY, USADepartment of Neurology, Mount Sinai, New York, NY, USAThe fat mass and obesity-associated gene ( FTO ) codes for a DNA/RNA demethylase. Pathological variants in this gene are rare, with only three reports in the literature, all with mutations in the catalytic domain. We report the first biallelic human variant in fat mass and obesity-associated gene (c.287G>C, p.Arg96Pro/R96P) outside the catalytic site, causing numerous abnormalities across multiple organ systems, affecting respiratory, cardiovascular, and neurological function. Biochemical assays of cells with the patient’s variant were performed to further quantify the effect of the variant on function. Loss-of-function resulting from the patient’s R96P missense variant was demonstrated with in vitro biochemical characterization of demethylase activity, resulting in a 90% reduction in function of the fat mass and obesity-associated protein compared to wild-type. Our findings demonstrate a novel fat mass and obesity-associated gene non-catalytic site variant with a unique patient phenotype of bilateral multifocal epilepsy and multisystem congenital anomalies.https://doi.org/10.1177/2050313X231188883
spellingShingle Naomi Mayman
Jiangbo Wei
Shangjun Cai
Rohan Soman
Hillary Raynes
Maite La Vega-Talbott
Chuan He
Thomas Naidich
G. Praveen Raju
Sathiji Kathiresu Nageshwaran
Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome
SAGE Open Medical Case Reports
title Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome
title_full Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome
title_fullStr Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome
title_full_unstemmed Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome
title_short Case report: A novel biallelic variant causing multisystem anomalies with severe epilepsy, widening the spectrum of syndrome
title_sort case report a novel biallelic variant causing multisystem anomalies with severe epilepsy widening the spectrum of syndrome
url https://doi.org/10.1177/2050313X231188883
work_keys_str_mv AT naomimayman casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT jiangbowei casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT shangjuncai casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT rohansoman casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT hillaryraynes casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT maitelavegatalbott casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT chuanhe casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT thomasnaidich casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT gpraveenraju casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome
AT sathijikathiresunageshwaran casereportanovelbiallelicvariantcausingmultisystemanomalieswithsevereepilepsywideningthespectrumofsyndrome