The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China
Casearia glomerata Roxb. is classified in Salicaceae and has a high economic value. Herein, we report the complete chloroplast (cp) genome of C. glomerata using Illumina sequence data. The cp genome is 156,809 bp in length and contains a large single-copy (LSC) region of 84,888 bp and a small single...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1936235 |
| _version_ | 1797638837394997248 |
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| author | Hui Huang Yanqiu Xie Site Luo Linting Zhang Chuanyuan Deng Zujian Chen |
| author_facet | Hui Huang Yanqiu Xie Site Luo Linting Zhang Chuanyuan Deng Zujian Chen |
| author_sort | Hui Huang |
| collection | DOAJ |
| description | Casearia glomerata Roxb. is classified in Salicaceae and has a high economic value. Herein, we report the complete chloroplast (cp) genome of C. glomerata using Illumina sequence data. The cp genome is 156,809 bp in length and contains a large single-copy (LSC) region of 84,888 bp and a small single-copy (SSC) region of 17,039 bp separated by two inverted repeat (IR) regions of 27,441 bp each. It contained a total of 123 genes, with an overall GC content of 36.81%. The phylogenetic analysis showed that C. glomerata is closely related to Casearia velutina. This study provides important sequence information for species identification and its phylogenetic relationship in the Salicaceae |
| first_indexed | 2024-03-11T13:09:09Z |
| format | Article |
| id | doaj.art-f809fd37e98d4c3788e7db541e6c6099 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:09:09Z |
| publishDate | 2021-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f809fd37e98d4c3788e7db541e6c60992023-11-03T14:16:12ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-07-01671932193310.1080/23802359.2021.19362351936235The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, ChinaHui Huang0Yanqiu Xie1Site Luo2Linting Zhang3Chuanyuan Deng4Zujian Chen5College of Landscape Architecture, Fujian Agriculture and Forestry UniversityCollege of Landscape Architecture, Fujian Agriculture and Forestry UniversitySchool of Life Sciences, Xiamen UniversityIsland Research Center, Ministry of Natural ResourcesCollege of Landscape Architecture, Fujian Agriculture and Forestry UniversityCollege of Landscape Architecture, Fujian Agriculture and Forestry UniversityCasearia glomerata Roxb. is classified in Salicaceae and has a high economic value. Herein, we report the complete chloroplast (cp) genome of C. glomerata using Illumina sequence data. The cp genome is 156,809 bp in length and contains a large single-copy (LSC) region of 84,888 bp and a small single-copy (SSC) region of 17,039 bp separated by two inverted repeat (IR) regions of 27,441 bp each. It contained a total of 123 genes, with an overall GC content of 36.81%. The phylogenetic analysis showed that C. glomerata is closely related to Casearia velutina. This study provides important sequence information for species identification and its phylogenetic relationship in the Salicaceaehttp://dx.doi.org/10.1080/23802359.2021.1936235casearia glomeratachloroplast genomephylogeny |
| spellingShingle | Hui Huang Yanqiu Xie Site Luo Linting Zhang Chuanyuan Deng Zujian Chen The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China Mitochondrial DNA. Part B. Resources casearia glomerata chloroplast genome phylogeny |
| title | The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China |
| title_full | The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China |
| title_fullStr | The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China |
| title_full_unstemmed | The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China |
| title_short | The complete chloroplast genome sequence of Casearia glomerata Roxb. (Malpighiales; Salicaceae) from Fujian, China |
| title_sort | complete chloroplast genome sequence of casearia glomerata roxb malpighiales salicaceae from fujian china |
| topic | casearia glomerata chloroplast genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2021.1936235 |
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