Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications
Vicia costata Ledeb. is a fine leguminous pasture which has advantages of drought resistance and barren tolerance. In this study, the complete chloroplast (cp) genome of V. costata was assembled and annotated. The total genome size of V. costata was 134,184 bp in length with IR loss. The cp genome e...
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1825136 |
| _version_ | 1797639116238618624 |
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| author | Fengyan Yi Chunfang Zhan Huimin Wang Xiaohong Yan Ruhan Ye Qing Gong Xiao Qiu Qingsong Liu Hailian Sun |
| author_facet | Fengyan Yi Chunfang Zhan Huimin Wang Xiaohong Yan Ruhan Ye Qing Gong Xiao Qiu Qingsong Liu Hailian Sun |
| author_sort | Fengyan Yi |
| collection | DOAJ |
| description | Vicia costata Ledeb. is a fine leguminous pasture which has advantages of drought resistance and barren tolerance. In this study, the complete chloroplast (cp) genome of V. costata was assembled and annotated. The total genome size of V. costata was 134,184 bp in length with IR loss. The cp genome encoded a set of 112 genes, containing 74 protein-coding genes, 34 tRNA genes, and 4 rRNA genes. The overall GC content was 34.82%. Phylogenetic analysis showed that V. costata got together with the same genus species V. ramuliflora, V. bungei, V. faba, V. sativa and V. sepium with high support value, and V. costata had a close relationship with V. ramuliflora. The whole cp genome of V. costata will be a useful resource for future studies on phylogeny and conservation in Vicia. |
| first_indexed | 2024-03-11T13:13:14Z |
| format | Article |
| id | doaj.art-f84a1d3873744a91b9870ceefbdaa819 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:14Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f84a1d3873744a91b9870ceefbdaa8192023-11-03T14:00:33ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533463346410.1080/23802359.2020.18251361825136Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implicationsFengyan Yi0Chunfang Zhan1Huimin Wang2Xiaohong Yan3Ruhan Ye4Qing Gong5Xiao Qiu6Qingsong Liu7Hailian Sun8Inner Mongolia Academy of Agricultural and Animal Husbandry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesCangZhou Academy of Agriculture and Forestry SciencesInner Mongolia Academy of Agricultural and Animal Husbandry SciencesVicia costata Ledeb. is a fine leguminous pasture which has advantages of drought resistance and barren tolerance. In this study, the complete chloroplast (cp) genome of V. costata was assembled and annotated. The total genome size of V. costata was 134,184 bp in length with IR loss. The cp genome encoded a set of 112 genes, containing 74 protein-coding genes, 34 tRNA genes, and 4 rRNA genes. The overall GC content was 34.82%. Phylogenetic analysis showed that V. costata got together with the same genus species V. ramuliflora, V. bungei, V. faba, V. sativa and V. sepium with high support value, and V. costata had a close relationship with V. ramuliflora. The whole cp genome of V. costata will be a useful resource for future studies on phylogeny and conservation in Vicia.http://dx.doi.org/10.1080/23802359.2020.1825136fabaceaechloroplast genomevicia costataphylogenetic analysis |
| spellingShingle | Fengyan Yi Chunfang Zhan Huimin Wang Xiaohong Yan Ruhan Ye Qing Gong Xiao Qiu Qingsong Liu Hailian Sun Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications Mitochondrial DNA. Part B. Resources fabaceae chloroplast genome vicia costata phylogenetic analysis |
| title | Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications |
| title_full | Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications |
| title_fullStr | Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications |
| title_full_unstemmed | Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications |
| title_short | Characterization of the complete chloroplast genome sequence of Vicia costata (Fabaceae) and its phylogenetic implications |
| title_sort | characterization of the complete chloroplast genome sequence of vicia costata fabaceae and its phylogenetic implications |
| topic | fabaceae chloroplast genome vicia costata phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1825136 |
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