The complete chloroplast genome of Agave angustifolia
Agave angustifolia is commonly used for the production of bacanora, a kind of fermented and distilled beverage in Mexico. In the present study, we have successfully assembled its chloroplast genome. The full length of the genome is 157,274 bp with the GC content of 37.84%. There is a large single co...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2021-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1941360 |
| _version_ | 1797638837616246784 |
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| author | Xu Qin Xinli Yang Xing Huang Gan Jin Xiangyan Yang Mi Wu Tao Chen Kexian Yi |
| author_facet | Xu Qin Xinli Yang Xing Huang Gan Jin Xiangyan Yang Mi Wu Tao Chen Kexian Yi |
| author_sort | Xu Qin |
| collection | DOAJ |
| description | Agave angustifolia is commonly used for the production of bacanora, a kind of fermented and distilled beverage in Mexico. In the present study, we have successfully assembled its chloroplast genome. The full length of the genome is 157,274 bp with the GC content of 37.84%. There is a large single copy region (LSC) of 85,895 bp, a pair of inverted repeat regions (IR) of 26,575 bp and a small single copy region (SSC) of 18,229 bp in the genome. A total of 132 genes are annotated in the cp genome. Among these, there are 86 protein-coding genes, 38 tRNAs and 8 rRNAs. Phylogenetic analysis reveals that A. angustifolia is closely related with A. H11648. |
| first_indexed | 2024-03-11T13:09:09Z |
| format | Article |
| id | doaj.art-f87a2d4fe92843e0b523119a80fc4441 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:09:09Z |
| publishDate | 2021-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f87a2d4fe92843e0b523119a80fc44412023-11-03T14:28:27ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-11-016113236323710.1080/23802359.2021.19413601941360The complete chloroplast genome of Agave angustifoliaXu Qin0Xinli Yang1Xing Huang2Gan Jin3Xiangyan Yang4Mi Wu5Tao Chen6Kexian Yi7Guangxi Subtropical Crops Research InstituteCollege of Tropical Crops, Hainan UniversityEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesGuangxi Subtropical Crops Research InstituteGuangxi Subtropical Crops Research InstituteGuangxi Subtropical Crops Research InstituteGuangxi Subtropical Crops Research InstituteEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesAgave angustifolia is commonly used for the production of bacanora, a kind of fermented and distilled beverage in Mexico. In the present study, we have successfully assembled its chloroplast genome. The full length of the genome is 157,274 bp with the GC content of 37.84%. There is a large single copy region (LSC) of 85,895 bp, a pair of inverted repeat regions (IR) of 26,575 bp and a small single copy region (SSC) of 18,229 bp in the genome. A total of 132 genes are annotated in the cp genome. Among these, there are 86 protein-coding genes, 38 tRNAs and 8 rRNAs. Phylogenetic analysis reveals that A. angustifolia is closely related with A. H11648.http://dx.doi.org/10.1080/23802359.2021.1941360agave angustifoliachloroplast genomephylogenetic tree |
| spellingShingle | Xu Qin Xinli Yang Xing Huang Gan Jin Xiangyan Yang Mi Wu Tao Chen Kexian Yi The complete chloroplast genome of Agave angustifolia Mitochondrial DNA. Part B. Resources agave angustifolia chloroplast genome phylogenetic tree |
| title | The complete chloroplast genome of Agave angustifolia |
| title_full | The complete chloroplast genome of Agave angustifolia |
| title_fullStr | The complete chloroplast genome of Agave angustifolia |
| title_full_unstemmed | The complete chloroplast genome of Agave angustifolia |
| title_short | The complete chloroplast genome of Agave angustifolia |
| title_sort | complete chloroplast genome of agave angustifolia |
| topic | agave angustifolia chloroplast genome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2021.1941360 |
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