Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis

The child microbiome, including gut and skin communities, is shaped by a multitude of factors, and breastfeeding is one of the most essential. Food allergy (FA) and atopic dermatitis (AD) are among the most common diseases in pediatrics, with the prevalence of each up to 6% and 20%, respectively. Th...

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Main Authors: Marcin Gołębiewski, Ewa Łoś-Rycharska, Marcin Sikora, Tomasz Grzybowski, Marta Gorzkiewicz, Aneta Krogulska
Format: Article
Language:English
Published: MDPI AG 2021-10-01
Series:Nutrients
Subjects:
Online Access:https://www.mdpi.com/2072-6643/13/10/3600
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author Marcin Gołębiewski
Ewa Łoś-Rycharska
Marcin Sikora
Tomasz Grzybowski
Marta Gorzkiewicz
Aneta Krogulska
author_facet Marcin Gołębiewski
Ewa Łoś-Rycharska
Marcin Sikora
Tomasz Grzybowski
Marta Gorzkiewicz
Aneta Krogulska
author_sort Marcin Gołębiewski
collection DOAJ
description The child microbiome, including gut and skin communities, is shaped by a multitude of factors, and breastfeeding is one of the most essential. Food allergy (FA) and atopic dermatitis (AD) are among the most common diseases in pediatrics, with the prevalence of each up to 6% and 20%, respectively. Therefore, we aimed at finding differences between the fecal and skin microbiomes of FA and AD patients in the context of breastfeeding, by means of the Illumina sequencing of 16S rRNA gene fragment libraries amplified from the total DNA isolated from samples collected from allergic and healthy infants. We also analyzed milk samples from the mothers of the examined children and searched for patterns of incidence suggesting milk influence on an infant’s allergy status. Here we show that a mother’s milk influences her child’s fecal and skin microbiomes and identify <i>Acinetobacter</i> as the taxon whose abundance is correlated with milk and child-derived samples. We demonstrate that breastfeeding makes allergic children's fecal and skin communities more similar to those of healthy infants than in the case of formula-feeding. We also identify signature taxa that might be important in maintaining health or allergy development.
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spelling doaj.art-f8871dd59ae9405fbcbbb674415325482023-11-22T19:31:11ZengMDPI AGNutrients2072-66432021-10-011310360010.3390/nu13103600Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot AnalysisMarcin Gołębiewski0Ewa Łoś-Rycharska1Marcin Sikora2Tomasz Grzybowski3Marta Gorzkiewicz4Aneta Krogulska5Department of Plant Physiology and Biotechnology, Nicolaus Copernicus University, 87-100 Torun, PolandDepartment of Pediatrics, Allergology and Gastroenterology, Collegium Medicum Bydgoszcz, Nicolaus Copernicus University, 87-100 Torun, PolandInterdisciplinary Centre of Modern Technologies, Nicolaus Copernicus University, 87-100 Torun, PolandDepartment of Forensic Medicine, Collegium Medicum Bydgoszcz, Nicolaus Copernicus University, 87-100 Torun, PolandDepartment of Forensic Medicine, Collegium Medicum Bydgoszcz, Nicolaus Copernicus University, 87-100 Torun, PolandDepartment of Pediatrics, Allergology and Gastroenterology, Collegium Medicum Bydgoszcz, Nicolaus Copernicus University, 87-100 Torun, PolandThe child microbiome, including gut and skin communities, is shaped by a multitude of factors, and breastfeeding is one of the most essential. Food allergy (FA) and atopic dermatitis (AD) are among the most common diseases in pediatrics, with the prevalence of each up to 6% and 20%, respectively. Therefore, we aimed at finding differences between the fecal and skin microbiomes of FA and AD patients in the context of breastfeeding, by means of the Illumina sequencing of 16S rRNA gene fragment libraries amplified from the total DNA isolated from samples collected from allergic and healthy infants. We also analyzed milk samples from the mothers of the examined children and searched for patterns of incidence suggesting milk influence on an infant’s allergy status. Here we show that a mother’s milk influences her child’s fecal and skin microbiomes and identify <i>Acinetobacter</i> as the taxon whose abundance is correlated with milk and child-derived samples. We demonstrate that breastfeeding makes allergic children's fecal and skin communities more similar to those of healthy infants than in the case of formula-feeding. We also identify signature taxa that might be important in maintaining health or allergy development.https://www.mdpi.com/2072-6643/13/10/3600atopic dermatitisdysbacteriosis/microbial imbalancefood allergyfecesmother’s milkmicrobiota
spellingShingle Marcin Gołębiewski
Ewa Łoś-Rycharska
Marcin Sikora
Tomasz Grzybowski
Marta Gorzkiewicz
Aneta Krogulska
Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis
Nutrients
atopic dermatitis
dysbacteriosis/microbial imbalance
food allergy
feces
mother’s milk
microbiota
title Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis
title_full Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis
title_fullStr Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis
title_full_unstemmed Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis
title_short Mother’s Milk Microbiome Shaping Fecal and Skin Microbiota in Infants with Food Allergy and Atopic Dermatitis: A Pilot Analysis
title_sort mother s milk microbiome shaping fecal and skin microbiota in infants with food allergy and atopic dermatitis a pilot analysis
topic atopic dermatitis
dysbacteriosis/microbial imbalance
food allergy
feces
mother’s milk
microbiota
url https://www.mdpi.com/2072-6643/13/10/3600
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