Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria

Phenotypic variation present in a population arises due to genotypic and environmental effects, and the magnitude of phenotypic variability differs under different environmental conditions, therefore, the purpose of this study was to objectively describe the linear type traits of extensively managed...

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Main Authors: Moses OKPEKU, Abdulmojeed YAKUBU, Sunday Olusola PETERS, Michael Ohiokhuaobo OZOJE, Christian Obiora Ndubuisi IKEOBI, Olufunmilayo Ayoka ADEBAMBO, Ikhide Godwin IMUMORIN
Format: Article
Language:English
Published: University of Ljubljana Press (Založba Univerze v Ljubljani) 2011-12-01
Series:Acta Agriculturae Slovenica
Subjects:
Online Access:https://journals.uni-lj.si/aas/article/view/14580
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author Moses OKPEKU
Abdulmojeed YAKUBU
Sunday Olusola PETERS
Michael Ohiokhuaobo OZOJE
Christian Obiora Ndubuisi IKEOBI
Olufunmilayo Ayoka ADEBAMBO
Ikhide Godwin IMUMORIN
author_facet Moses OKPEKU
Abdulmojeed YAKUBU
Sunday Olusola PETERS
Michael Ohiokhuaobo OZOJE
Christian Obiora Ndubuisi IKEOBI
Olufunmilayo Ayoka ADEBAMBO
Ikhide Godwin IMUMORIN
author_sort Moses OKPEKU
collection DOAJ
description Phenotypic variation present in a population arises due to genotypic and environmental effects, and the magnitude of phenotypic variability differs under different environmental conditions, therefore, the purpose of this study was to objectively describe the linear type traits of extensively managed mature indigenous goats of Southern Nigeria and to predict body weight from their orthogonal shape characters using principal component analysis. Body weight and four body measurements namely, height at withers, neck length, body length and heart girth were measured in 265 randomly selected West African Dwarf (WAD) and Red Sokoto (RS) goats of both sexes. RS goats had significantly (P < 0.05) higher morphological traits compared to their WAD counterparts. Sexual dimorphism was observed in all the traits with higher values recorded for males. Phenotypic correlations among body weight and biometric traits were positive and highly significant (r = 0.76–0.91 versus 0.82–0.97 and 0.66–0.94 versus 0.83–0.91 for WAD and RS female and male goats, respectively). In the varimax rotated principal component factor analysis, two factors were extracted for each sex of the two breeds, although with varying degrees of factor loadings. The principal component based regression models, which are preferable for selecting animals for optimal balance, accounted for 89.00 and 96.00% as well as 81.00 and 91.00% of the variation in body weight of female and male WAD and RS goats, respectively. The information obtained could be useful in designing appropriate management, selection and breeding programmes for utilization of goat genetic resources.
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spelling doaj.art-f93842eb16f94946ac26cb902f1d72d12025-03-12T12:21:37ZengUniversity of Ljubljana Press (Založba Univerze v Ljubljani)Acta Agriculturae Slovenica1854-19412011-12-0198210110910.14720/aas.2011.98.2.1458020972Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern NigeriaMoses OKPEKU0Abdulmojeed YAKUBU1Sunday Olusola PETERS2Michael Ohiokhuaobo OZOJE3Christian Obiora Ndubuisi IKEOBI4Olufunmilayo Ayoka ADEBAMBO5Ikhide Godwin IMUMORIN6Niger Delta Univ., Dept. of Livestock Production Wilberforce Island, P.M.B. 071, Amassoma and Univ. of Agriculture, Dept. of Animal Breeding and Genetics, Abeokuta, P.M.B. 2240, Abeokuta, NigeriaNasarawa State Univ., Dept. of Animal Science, Fac. of Agriculture, Lafia Campus, P.M.B. 135, Lafia, NigeriaUniv. of Agriculture, Dept. of Animal Breeding and Genetics, Abeokuta, P.M.B. 2240, Abeokuta and Cornell Univ., Dept. of Animal Science, 267 Morrison Hall, Ithaca, NY 14853, NigeriaUniv. of Agriculture, Dept. of Animal Breeding and Genetics, Abeokuta, P.M.B. 2240, Abeokuta, NigeriaUniv. of Agriculture, Dept. of Animal Breeding and Genetics, Abeokuta, P.M.B. 2240, Abeokuta, NigeriaUniv. of Agriculture, Dept. of Animal Breeding and Genetics, Abeokuta, P.M.B. 2240, Abeokuta, NigeriaCornell Univ., Dept. of Animal Science, 267 Morrison Hall, Ithaca, NY 14853, USAPhenotypic variation present in a population arises due to genotypic and environmental effects, and the magnitude of phenotypic variability differs under different environmental conditions, therefore, the purpose of this study was to objectively describe the linear type traits of extensively managed mature indigenous goats of Southern Nigeria and to predict body weight from their orthogonal shape characters using principal component analysis. Body weight and four body measurements namely, height at withers, neck length, body length and heart girth were measured in 265 randomly selected West African Dwarf (WAD) and Red Sokoto (RS) goats of both sexes. RS goats had significantly (P < 0.05) higher morphological traits compared to their WAD counterparts. Sexual dimorphism was observed in all the traits with higher values recorded for males. Phenotypic correlations among body weight and biometric traits were positive and highly significant (r = 0.76–0.91 versus 0.82–0.97 and 0.66–0.94 versus 0.83–0.91 for WAD and RS female and male goats, respectively). In the varimax rotated principal component factor analysis, two factors were extracted for each sex of the two breeds, although with varying degrees of factor loadings. The principal component based regression models, which are preferable for selecting animals for optimal balance, accounted for 89.00 and 96.00% as well as 81.00 and 91.00% of the variation in body weight of female and male WAD and RS goats, respectively. The information obtained could be useful in designing appropriate management, selection and breeding programmes for utilization of goat genetic resources.https://journals.uni-lj.si/aas/article/view/14580goatsautochthonous breedsbody traitsmultivariate analysisnigeria
spellingShingle Moses OKPEKU
Abdulmojeed YAKUBU
Sunday Olusola PETERS
Michael Ohiokhuaobo OZOJE
Christian Obiora Ndubuisi IKEOBI
Olufunmilayo Ayoka ADEBAMBO
Ikhide Godwin IMUMORIN
Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
Acta Agriculturae Slovenica
goats
autochthonous breeds
body traits
multivariate analysis
nigeria
title Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
title_full Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
title_fullStr Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
title_full_unstemmed Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
title_short Application of multivariate principal component analysis to morphological characterization of indigenous goats in Southern Nigeria
title_sort application of multivariate principal component analysis to morphological characterization of indigenous goats in southern nigeria
topic goats
autochthonous breeds
body traits
multivariate analysis
nigeria
url https://journals.uni-lj.si/aas/article/view/14580
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