An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China

The Omicron variants spread rapidly worldwide after being initially detected in South Africa in November 2021. It showed increased transmissibility and immune evasion with far more amino acid mutations in the spike (S) protein than the previously circulating variants of concern (VOCs). Notably, on 1...

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Main Authors: Meiling Zhang, Zhixiao Chen, Jienan Zhou, Xiaonan Zhao, Yaoyao Chen, Yanhong Sun, Zhaosheng Liu, Wenpeng Gu, Chunrui Luo, Xiaoqing Fu, Xiang Zhao
Format: Article
Language:English
Published: Elsevier 2022-12-01
Series:Biosafety and Health
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2590053622001549
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author Meiling Zhang
Zhixiao Chen
Jienan Zhou
Xiaonan Zhao
Yaoyao Chen
Yanhong Sun
Zhaosheng Liu
Wenpeng Gu
Chunrui Luo
Xiaoqing Fu
Xiang Zhao
author_facet Meiling Zhang
Zhixiao Chen
Jienan Zhou
Xiaonan Zhao
Yaoyao Chen
Yanhong Sun
Zhaosheng Liu
Wenpeng Gu
Chunrui Luo
Xiaoqing Fu
Xiang Zhao
author_sort Meiling Zhang
collection DOAJ
description The Omicron variants spread rapidly worldwide after being initially detected in South Africa in November 2021. It showed increased transmissibility and immune evasion with far more amino acid mutations in the spike (S) protein than the previously circulating variants of concern (VOCs). Notably, on 15 July 2022, we monitored the first VOC / Omicron subvariant BA.2.75 in China from an imported case. Moreover, nowadays, this subvariant still is predominant in India. It has nine additional mutations in the S protein compared to BA.2, three of which (W152R, G446S, and R493Q reversion) might contribute to higher transmissibility and immune escape. This subvariant could cause wider spread and pose a threat to the global situation. Our timely reporting and continuous genomic analysis are essential to fully elucidate the characteristics of the subvariant BA.2.75 in the future.
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spelling doaj.art-f9f93c4cc5a44a2985379b1988db37502022-12-22T03:01:18ZengElsevierBiosafety and Health2590-05362022-12-0146406409An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, ChinaMeiling Zhang0Zhixiao Chen1Jienan Zhou2Xiaonan Zhao3Yaoyao Chen4Yanhong Sun5Zhaosheng Liu6Wenpeng Gu7Chunrui Luo8Xiaoqing Fu9Xiang Zhao10Yunnan Center for Disease Control and Prevention, Kunming 650022, China; Corresponding authors: Yunnan Center for Disease Control and Prevention, Kunming 650022, China (M. Zhang and X. Fu); National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China (X. Zhao).National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, ChinaYunnan Center for Disease Control and Prevention, Kunming 650022, China; Corresponding authors: Yunnan Center for Disease Control and Prevention, Kunming 650022, China (M. Zhang and X. Fu); National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China (X. Zhao).National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China; Corresponding authors: Yunnan Center for Disease Control and Prevention, Kunming 650022, China (M. Zhang and X. Fu); National Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China (X. Zhao).The Omicron variants spread rapidly worldwide after being initially detected in South Africa in November 2021. It showed increased transmissibility and immune evasion with far more amino acid mutations in the spike (S) protein than the previously circulating variants of concern (VOCs). Notably, on 15 July 2022, we monitored the first VOC / Omicron subvariant BA.2.75 in China from an imported case. Moreover, nowadays, this subvariant still is predominant in India. It has nine additional mutations in the S protein compared to BA.2, three of which (W152R, G446S, and R493Q reversion) might contribute to higher transmissibility and immune escape. This subvariant could cause wider spread and pose a threat to the global situation. Our timely reporting and continuous genomic analysis are essential to fully elucidate the characteristics of the subvariant BA.2.75 in the future.http://www.sciencedirect.com/science/article/pii/S2590053622001549SARS-CoV-2Omicron subvariantMutationsGenomic analysis
spellingShingle Meiling Zhang
Zhixiao Chen
Jienan Zhou
Xiaonan Zhao
Yaoyao Chen
Yanhong Sun
Zhaosheng Liu
Wenpeng Gu
Chunrui Luo
Xiaoqing Fu
Xiang Zhao
An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China
Biosafety and Health
SARS-CoV-2
Omicron subvariant
Mutations
Genomic analysis
title An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China
title_full An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China
title_fullStr An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China
title_full_unstemmed An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China
title_short An imported human case with the SARS-CoV-2 Omicron subvariant BA.2.75 in Yunnan Province, China
title_sort imported human case with the sars cov 2 omicron subvariant ba 2 75 in yunnan province china
topic SARS-CoV-2
Omicron subvariant
Mutations
Genomic analysis
url http://www.sciencedirect.com/science/article/pii/S2590053622001549
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