Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal

Coronaviruses (CoVs) are RNA viruses capable of infecting a wide range of hosts, including mammals and birds, and have caused significant epidemics such as the ongoing COVID-19 pandemic. Bats, the second most diverse mammalian order, are hosts for various CoVs due to their unique immune responses an...

Full description

Bibliographic Details
Main Authors: Mahima Hemnani, Priscilla Gomes da Silva, Gertrude Thompson, Patrícia Poeta, Hugo Rebelo, João R. Mesquita
Format: Article
Language:English
Published: MDPI AG 2024-03-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/16/3/434
_version_ 1797239137922711552
author Mahima Hemnani
Priscilla Gomes da Silva
Gertrude Thompson
Patrícia Poeta
Hugo Rebelo
João R. Mesquita
author_facet Mahima Hemnani
Priscilla Gomes da Silva
Gertrude Thompson
Patrícia Poeta
Hugo Rebelo
João R. Mesquita
author_sort Mahima Hemnani
collection DOAJ
description Coronaviruses (CoVs) are RNA viruses capable of infecting a wide range of hosts, including mammals and birds, and have caused significant epidemics such as the ongoing COVID-19 pandemic. Bats, the second most diverse mammalian order, are hosts for various CoVs due to their unique immune responses and ecological traits. This study investigates CoV prevalence in crevice- and tree-dwelling bats in Portugal, a country with limited prior research on bat CoVs. Using nested RT-PCR and sequencing, we screened 87 stool samples from bats, identifying one sample (1.15%) that was positive for <i>Alphacoronavirus</i>, belonging to <i>Pipistrellus pipistrellus</i>. Phylogenetic analysis revealed close genetic relationships with <i>Alphacoronavirus</i> strains from the same bat species in Europe. The low prevalence suggests habitat-specific differences in viral transmission, with cave-dwelling bats exhibiting higher CoV prevalence due to population density and behaviour. These findings underscore the necessity for sustained surveillance efforts aimed at comprehending CoV dynamics within bat populations, especially concerning the risk of spillover events and viral evolution. Vital to this understanding is the monitoring of bat migration patterns, which serves as a crucial tool for elucidating CoV ecology and epidemiology. Such efforts are essential for ongoing research endeavours aimed at mitigating the potential for future zoonotic disease outbreaks.
first_indexed 2024-04-24T17:46:46Z
format Article
id doaj.art-fa1024597f624f57883396cf6de55add
institution Directory Open Access Journal
issn 1999-4915
language English
last_indexed 2024-04-24T17:46:46Z
publishDate 2024-03-01
publisher MDPI AG
record_format Article
series Viruses
spelling doaj.art-fa1024597f624f57883396cf6de55add2024-03-27T14:07:52ZengMDPI AGViruses1999-49152024-03-0116343410.3390/v16030434Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from PortugalMahima Hemnani0Priscilla Gomes da Silva1Gertrude Thompson2Patrícia Poeta3Hugo Rebelo4João R. Mesquita5School of Medicine and Biomedical Sciences, Porto University, 4050-313 Porto, PortugalSchool of Medicine and Biomedical Sciences, Porto University, 4050-313 Porto, PortugalSchool of Medicine and Biomedical Sciences, Porto University, 4050-313 Porto, PortugalMicrobiology and Antibiotic Resistance Team (MicroART), Department of Veterinary Sciences, University of Trás-os Montes e Alto Douro, 5000-801 Vila Real, PortugalBiopolis-CIBIO/InBIO Laboratório Associado, Campus de Vairão, 4485-661 Vairão, PortugalSchool of Medicine and Biomedical Sciences, Porto University, 4050-313 Porto, PortugalCoronaviruses (CoVs) are RNA viruses capable of infecting a wide range of hosts, including mammals and birds, and have caused significant epidemics such as the ongoing COVID-19 pandemic. Bats, the second most diverse mammalian order, are hosts for various CoVs due to their unique immune responses and ecological traits. This study investigates CoV prevalence in crevice- and tree-dwelling bats in Portugal, a country with limited prior research on bat CoVs. Using nested RT-PCR and sequencing, we screened 87 stool samples from bats, identifying one sample (1.15%) that was positive for <i>Alphacoronavirus</i>, belonging to <i>Pipistrellus pipistrellus</i>. Phylogenetic analysis revealed close genetic relationships with <i>Alphacoronavirus</i> strains from the same bat species in Europe. The low prevalence suggests habitat-specific differences in viral transmission, with cave-dwelling bats exhibiting higher CoV prevalence due to population density and behaviour. These findings underscore the necessity for sustained surveillance efforts aimed at comprehending CoV dynamics within bat populations, especially concerning the risk of spillover events and viral evolution. Vital to this understanding is the monitoring of bat migration patterns, which serves as a crucial tool for elucidating CoV ecology and epidemiology. Such efforts are essential for ongoing research endeavours aimed at mitigating the potential for future zoonotic disease outbreaks.https://www.mdpi.com/1999-4915/16/3/434coronaviruses<i>Alphacoronavirus</i><i>Pipistrellus pipistrellus</i>
spellingShingle Mahima Hemnani
Priscilla Gomes da Silva
Gertrude Thompson
Patrícia Poeta
Hugo Rebelo
João R. Mesquita
Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal
Viruses
coronaviruses
<i>Alphacoronavirus</i>
<i>Pipistrellus pipistrellus</i>
title Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal
title_full Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal
title_fullStr Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal
title_full_unstemmed Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal
title_short Presence of <i>Alphacoronavirus</i> in Tree- and Crevice-Dwelling Bats from Portugal
title_sort presence of i alphacoronavirus i in tree and crevice dwelling bats from portugal
topic coronaviruses
<i>Alphacoronavirus</i>
<i>Pipistrellus pipistrellus</i>
url https://www.mdpi.com/1999-4915/16/3/434
work_keys_str_mv AT mahimahemnani presenceofialphacoronavirusiintreeandcrevicedwellingbatsfromportugal
AT priscillagomesdasilva presenceofialphacoronavirusiintreeandcrevicedwellingbatsfromportugal
AT gertrudethompson presenceofialphacoronavirusiintreeandcrevicedwellingbatsfromportugal
AT patriciapoeta presenceofialphacoronavirusiintreeandcrevicedwellingbatsfromportugal
AT hugorebelo presenceofialphacoronavirusiintreeandcrevicedwellingbatsfromportugal
AT joaormesquita presenceofialphacoronavirusiintreeandcrevicedwellingbatsfromportugal