Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers

Pyrimidines play an important role in modern medical fields. They have a wide spectrum of biological activities such as antimicrobial, anticancer, anti-allergic, anti-leishmanial, antioxidant agents and others. Moreover, in recent years, 3,4-dihydropyrimidin-2(1H)ones have attracted researchers to s...

Full description

Bibliographic Details
Main Authors: Yasser M. Zohny, Samir M. Awad, Maha A. Rabie, Omar Awad Alsaidan
Format: Article
Language:English
Published: MDPI AG 2023-06-01
Series:Molecules
Subjects:
Online Access:https://www.mdpi.com/1420-3049/28/12/4869
_version_ 1797593283964174336
author Yasser M. Zohny
Samir M. Awad
Maha A. Rabie
Omar Awad Alsaidan
author_facet Yasser M. Zohny
Samir M. Awad
Maha A. Rabie
Omar Awad Alsaidan
author_sort Yasser M. Zohny
collection DOAJ
description Pyrimidines play an important role in modern medical fields. They have a wide spectrum of biological activities such as antimicrobial, anticancer, anti-allergic, anti-leishmanial, antioxidant agents and others. Moreover, in recent years, 3,4-dihydropyrimidin-2(1H)ones have attracted researchers to synthesize them via Biginelli reaction and evaluate their antihypertensive activities as bioisosters of Nifedipine, which is a famous calcium channel blocker. Our new target compounds were prepared through one-pot reaction of thiourea <b>1</b>, ethyl acetoacetate <b>2</b> and/or 1H-indole-2-carbaldehyde, 2-chloroquinoline-3-carbaldehyde, 1,3-diphenyl-1H-pyrazole-4-carbaldehyde, <b>3a</b>–<b>c</b> in acid medium (HCl) yielding pyrimidines <b>4a</b>–<b>c</b>, which in turn were hydrolyzed to carboxylic acid derivatives <b>5a</b>–<b>c</b> which were chlorinated by SOCl<sub>2</sub> to give acyl chlorides <b>6a</b>–<b>c</b>. Finally, the latter were reacted with some selected aromatic amines, namely, aniline, p-toluidine and p-nitroaniline, producing amides <b>7a</b>–<b>c, 8a</b>–<b>c,</b> and <b>9a</b>–<b>c</b>. The purity of the prepared compounds was examined via TLC monitoring, and structures were confirmed by different spectroscopic techniques such as IR, <sup>1</sup>HNMR, <sup>13</sup>CNMR, and mass spectroscopy. The in vivo evaluation of the antihypertensive activity revealed that compounds <b>4c, 7a, 7c, 8c, 9b</b> and <b>9c</b> had comparable antihypertensive properties with Nifedipine. On the other hand, the in vitro calcium channel blocking activity was evaluated by IC<sub>50</sub> measurement and results revealed that compounds <b>4c, 7a, 7b, 7c, 8c, 9a, 9b,</b> and <b>9c</b> had comparable calcium channel blocking activity with the reference Nifedipine. Based on the aforementioned biological results, we selected compounds <b>8c</b> and <b>9c</b> to be docked onto Ryanodine and dihydropyridine receptors. Furthermore, we developed a structure–activity relationship. The designed compounds in this study show promising activity profiles in reducing blood pressure and as calcium channel blockers, and could be considered as new potential antihypertensive and/or antianginal agents.
first_indexed 2024-03-11T02:06:48Z
format Article
id doaj.art-fa41e8f2662249daa32f4e084bdb4d95
institution Directory Open Access Journal
issn 1420-3049
language English
last_indexed 2024-03-11T02:06:48Z
publishDate 2023-06-01
publisher MDPI AG
record_format Article
series Molecules
spelling doaj.art-fa41e8f2662249daa32f4e084bdb4d952023-11-18T11:51:30ZengMDPI AGMolecules1420-30492023-06-012812486910.3390/molecules28124869Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel BlockersYasser M. Zohny0Samir M. Awad1Maha A. Rabie2Omar Awad Alsaidan3Pharmaceutical Sciences Department, College of Pharmacy, Shaqra University, Dawadmi 11911, Saudi ArabiaPharmaceutical Organic Chemistry Department, Faculty of Pharmacy, Helwan University, Cairo 11795, EgyptPharmacy Practice Department, College of Pharmacy, Shaqra University, Dawadmi 11911, Saudi ArabiaDepartment of Pharmaceutics, College of Pharmacy, Jouf University, Sakaka 72341, Saudi ArabiaPyrimidines play an important role in modern medical fields. They have a wide spectrum of biological activities such as antimicrobial, anticancer, anti-allergic, anti-leishmanial, antioxidant agents and others. Moreover, in recent years, 3,4-dihydropyrimidin-2(1H)ones have attracted researchers to synthesize them via Biginelli reaction and evaluate their antihypertensive activities as bioisosters of Nifedipine, which is a famous calcium channel blocker. Our new target compounds were prepared through one-pot reaction of thiourea <b>1</b>, ethyl acetoacetate <b>2</b> and/or 1H-indole-2-carbaldehyde, 2-chloroquinoline-3-carbaldehyde, 1,3-diphenyl-1H-pyrazole-4-carbaldehyde, <b>3a</b>–<b>c</b> in acid medium (HCl) yielding pyrimidines <b>4a</b>–<b>c</b>, which in turn were hydrolyzed to carboxylic acid derivatives <b>5a</b>–<b>c</b> which were chlorinated by SOCl<sub>2</sub> to give acyl chlorides <b>6a</b>–<b>c</b>. Finally, the latter were reacted with some selected aromatic amines, namely, aniline, p-toluidine and p-nitroaniline, producing amides <b>7a</b>–<b>c, 8a</b>–<b>c,</b> and <b>9a</b>–<b>c</b>. The purity of the prepared compounds was examined via TLC monitoring, and structures were confirmed by different spectroscopic techniques such as IR, <sup>1</sup>HNMR, <sup>13</sup>CNMR, and mass spectroscopy. The in vivo evaluation of the antihypertensive activity revealed that compounds <b>4c, 7a, 7c, 8c, 9b</b> and <b>9c</b> had comparable antihypertensive properties with Nifedipine. On the other hand, the in vitro calcium channel blocking activity was evaluated by IC<sub>50</sub> measurement and results revealed that compounds <b>4c, 7a, 7b, 7c, 8c, 9a, 9b,</b> and <b>9c</b> had comparable calcium channel blocking activity with the reference Nifedipine. Based on the aforementioned biological results, we selected compounds <b>8c</b> and <b>9c</b> to be docked onto Ryanodine and dihydropyridine receptors. Furthermore, we developed a structure–activity relationship. The designed compounds in this study show promising activity profiles in reducing blood pressure and as calcium channel blockers, and could be considered as new potential antihypertensive and/or antianginal agents.https://www.mdpi.com/1420-3049/28/12/48693,4-dihydropyrimidin-2(1H)onesnifedipine isostersantihypertensivecalcium channel blocking
spellingShingle Yasser M. Zohny
Samir M. Awad
Maha A. Rabie
Omar Awad Alsaidan
Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers
Molecules
3,4-dihydropyrimidin-2(1H)ones
nifedipine isosters
antihypertensive
calcium channel blocking
title Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers
title_full Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers
title_fullStr Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers
title_full_unstemmed Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers
title_short Design, Synthesis, Molecular Modeling, and Biological Evaluation of Novel Pyrimidine Derivatives as Potential Calcium Channel Blockers
title_sort design synthesis molecular modeling and biological evaluation of novel pyrimidine derivatives as potential calcium channel blockers
topic 3,4-dihydropyrimidin-2(1H)ones
nifedipine isosters
antihypertensive
calcium channel blocking
url https://www.mdpi.com/1420-3049/28/12/4869
work_keys_str_mv AT yassermzohny designsynthesismolecularmodelingandbiologicalevaluationofnovelpyrimidinederivativesaspotentialcalciumchannelblockers
AT samirmawad designsynthesismolecularmodelingandbiologicalevaluationofnovelpyrimidinederivativesaspotentialcalciumchannelblockers
AT mahaarabie designsynthesismolecularmodelingandbiologicalevaluationofnovelpyrimidinederivativesaspotentialcalciumchannelblockers
AT omarawadalsaidan designsynthesismolecularmodelingandbiologicalevaluationofnovelpyrimidinederivativesaspotentialcalciumchannelblockers