A comprehensive characterization of simple sequence repeats in the sequenced Trichoderma genomes provides valuable resources for marker development

A comprehensive characterization of simple sequence repeats in the sequenced Trichoderma genomes provides valuable resources for marker development

Members of genus Trichoderma are known worldwide for mycoparasitism. To gain a better insight into the organization and evolution of their genomes, we used an in-silico approach to compare the occurrence, relative abundance and density of SSRs in T.atroviride, T. harzianum, T. reesei, and T. virens....

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Main Authors: Sahil eMahfooz, Satyendra Pratap Singh, Ramraje eRakh, Arpita eBhattacharya, Nishtha eMishra, Poonam Chaudhary Singh, Puneet Singh Chauhan, Chandra Shekhar Nautiyal, Aradhana eMishra
Format: Article
Language:English
Published: Frontiers Media S.A. 2016-04-01
Series:Frontiers in Microbiology
Subjects:
Trichoderma
Comparative genomics
genetic diversity
microsatellites
motif conservation
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00575/full

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