TMO: time and memory optimized algorithm applicable for more accurate alignment of trinucleotide repeat disorders associated genes

In this study, time and memory optimized (TMO) algorithm is presented. Compared with Smith–Waterman's algorithm, TMO is applicable for a more accurate detection of continuous insertion/deletions (indels) in genes’ fragments, associated with disorders caused by over-repetition of a certain codon...

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Bibliographic Details
Main Authors: Done Stojanov, Ana Madevska Bogdanova, Tomasz Marcin Orzechowski
Format: Article
Language:English
Published: Taylor & Francis Group 2016-03-01
Series:Biotechnology & Biotechnological Equipment
Subjects:
Online Access:http://dx.doi.org/10.1080/13102818.2015.1114428