Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli

Summary: The stringent response of bacteria to starvation and stress also fulfills a role in addressing the threat of antibiotics. Within this stringent response, (p)ppGpp, synthesized by RelA or SpoT, functions as a global alarmone. However, the effect of this (p)ppGpp on resistance development is...

Full description

Bibliographic Details
Main Authors: Wenxi Qi, Martijs J. Jonker, Wim de Leeuw, Stanley Brul, Benno H. ter Kuile
Format: Article
Language:English
Published: Elsevier 2024-04-01
Series:iScience
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589004224008010
_version_ 1827292091983593472
author Wenxi Qi
Martijs J. Jonker
Wim de Leeuw
Stanley Brul
Benno H. ter Kuile
author_facet Wenxi Qi
Martijs J. Jonker
Wim de Leeuw
Stanley Brul
Benno H. ter Kuile
author_sort Wenxi Qi
collection DOAJ
description Summary: The stringent response of bacteria to starvation and stress also fulfills a role in addressing the threat of antibiotics. Within this stringent response, (p)ppGpp, synthesized by RelA or SpoT, functions as a global alarmone. However, the effect of this (p)ppGpp on resistance development is poorly understood. Here, we show that knockout of relA or rpoS curtails resistance development against bactericidal antibiotics. The emergence of mutated genes associated with starvation and (p)ppGpp, among others, indicates the activation of stringent responses. The growth rate is decreased in ΔrelA-resistant strains due to the reduced ability to synthesize (p)ppGpp and the persistence of deacylated tRNA impeding protein synthesis. Sluggish cellular activity causes decreased production of reactive oxygen species (ROS), thereby reducing oxidative damage, leading to weakened DNA mismatch repair, potentially reducing the generation of mutations. These findings offer new targets for mitigating antibiotic resistance development, potentially achieved through inhibiting (p)ppGpp or ROS synthesis.
first_indexed 2024-04-24T12:51:40Z
format Article
id doaj.art-fc72b00c30104d6f8352fa821e17ca20
institution Directory Open Access Journal
issn 2589-0042
language English
last_indexed 2024-04-24T12:51:40Z
publishDate 2024-04-01
publisher Elsevier
record_format Article
series iScience
spelling doaj.art-fc72b00c30104d6f8352fa821e17ca202024-04-06T04:40:19ZengElsevieriScience2589-00422024-04-01274109579Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coliWenxi Qi0Martijs J. Jonker1Wim de Leeuw2Stanley Brul3Benno H. ter Kuile4Laboratory for Molecular Biology and Microbial Food Safety, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the NetherlandsRNA Biology & Applied Bioinformatics, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the NetherlandsRNA Biology & Applied Bioinformatics, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the NetherlandsLaboratory for Molecular Biology and Microbial Food Safety, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the NetherlandsLaboratory for Molecular Biology and Microbial Food Safety, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands; Corresponding authorSummary: The stringent response of bacteria to starvation and stress also fulfills a role in addressing the threat of antibiotics. Within this stringent response, (p)ppGpp, synthesized by RelA or SpoT, functions as a global alarmone. However, the effect of this (p)ppGpp on resistance development is poorly understood. Here, we show that knockout of relA or rpoS curtails resistance development against bactericidal antibiotics. The emergence of mutated genes associated with starvation and (p)ppGpp, among others, indicates the activation of stringent responses. The growth rate is decreased in ΔrelA-resistant strains due to the reduced ability to synthesize (p)ppGpp and the persistence of deacylated tRNA impeding protein synthesis. Sluggish cellular activity causes decreased production of reactive oxygen species (ROS), thereby reducing oxidative damage, leading to weakened DNA mismatch repair, potentially reducing the generation of mutations. These findings offer new targets for mitigating antibiotic resistance development, potentially achieved through inhibiting (p)ppGpp or ROS synthesis.http://www.sciencedirect.com/science/article/pii/S2589004224008010Molecular biologyMicrobiology
spellingShingle Wenxi Qi
Martijs J. Jonker
Wim de Leeuw
Stanley Brul
Benno H. ter Kuile
Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli
iScience
Molecular biology
Microbiology
title Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli
title_full Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli
title_fullStr Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli
title_full_unstemmed Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli
title_short Role of RelA-synthesized (p)ppGpp and ROS-induced mutagenesis in de novo acquisition of antibiotic resistance in E. coli
title_sort role of rela synthesized p ppgpp and ros induced mutagenesis in de novo acquisition of antibiotic resistance in e coli
topic Molecular biology
Microbiology
url http://www.sciencedirect.com/science/article/pii/S2589004224008010
work_keys_str_mv AT wenxiqi roleofrelasynthesizedpppgppandrosinducedmutagenesisindenovoacquisitionofantibioticresistanceinecoli
AT martijsjjonker roleofrelasynthesizedpppgppandrosinducedmutagenesisindenovoacquisitionofantibioticresistanceinecoli
AT wimdeleeuw roleofrelasynthesizedpppgppandrosinducedmutagenesisindenovoacquisitionofantibioticresistanceinecoli
AT stanleybrul roleofrelasynthesizedpppgppandrosinducedmutagenesisindenovoacquisitionofantibioticresistanceinecoli
AT bennohterkuile roleofrelasynthesizedpppgppandrosinducedmutagenesisindenovoacquisitionofantibioticresistanceinecoli