Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates

High-throughput phenotyping technologies have become an increasingly important topic of crop science in recent years. Various sensors and data acquisition approaches have been applied to acquire the phenotyping traits. It is quite confusing for crop phenotyping researchers to determine an appropriat...

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Main Authors: Yongjian Wang, Weiliang Wen, Sheng Wu, Chuanyu Wang, Zetao Yu, Xinyu Guo, Chunjiang Zhao
Format: Article
Language:English
Published: MDPI AG 2018-12-01
Series:Remote Sensing
Subjects:
Online Access:http://www.mdpi.com/2072-4292/11/1/63
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author Yongjian Wang
Weiliang Wen
Sheng Wu
Chuanyu Wang
Zetao Yu
Xinyu Guo
Chunjiang Zhao
author_facet Yongjian Wang
Weiliang Wen
Sheng Wu
Chuanyu Wang
Zetao Yu
Xinyu Guo
Chunjiang Zhao
author_sort Yongjian Wang
collection DOAJ
description High-throughput phenotyping technologies have become an increasingly important topic of crop science in recent years. Various sensors and data acquisition approaches have been applied to acquire the phenotyping traits. It is quite confusing for crop phenotyping researchers to determine an appropriate way for their application. In this study, three representative three-dimensional (3D) data acquisition approaches, including 3D laser scanning, multi-view stereo (MVS) reconstruction, and 3D digitizing, were evaluated for maize plant phenotyping in multi growth stages. Phenotyping traits accuracy, post-processing difficulty, device cost, data acquisition efficiency, and automation were considered during the evaluation process. 3D scanning provided satisfactory point clouds for medium and high maize plants with acceptable efficiency, while the results were not satisfactory for small maize plants. The equipment used in 3D scanning is expensive, but is highly automatic. MVS reconstruction provided satisfactory point clouds for small and medium plants, and point deviations were observed in upper parts of higher plants. MVS data acquisition, using low-cost cameras, exhibited the highest efficiency among the three evaluated approaches. The one-by-one pipeline data acquisition pattern allows the use of MVS high-throughput in further phenotyping platforms. Undoubtedly, enhancement of point cloud processing technologies is required to improve the extracted phenotyping traits accuracy for both 3D scanning and MVS reconstruction. Finally, 3D digitizing was time-consuming and labor intensive. However, it does not depend on any post-processing algorithms to extract phenotyping parameters and reliable phenotyping traits could be derived. The promising accuracy of 3D digitizing is a better verification choice for other 3D phenotyping approaches. Our study provides clear reference about phenotyping data acquisition of maize plants, especially for the affordable and portable field phenotyping platforms to be developed.
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spelling doaj.art-fc7b31c4720a400fa5e7bdcdbfdfa4eb2022-12-21T20:04:18ZengMDPI AGRemote Sensing2072-42922018-12-011116310.3390/rs11010063rs11010063Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing EstimatesYongjian Wang0Weiliang Wen1Sheng Wu2Chuanyu Wang3Zetao Yu4Xinyu Guo5Chunjiang Zhao6Agricultural College, Nanjing Agricultural University, Nanjing 210095, ChinaBeijing Research Center for Information Technology in Agriculture, Beijing 100097, ChinaBeijing Research Center for Information Technology in Agriculture, Beijing 100097, ChinaBeijing Research Center for Information Technology in Agriculture, Beijing 100097, ChinaBeijing Research Center for Information Technology in Agriculture, Beijing 100097, ChinaBeijing Research Center for Information Technology in Agriculture, Beijing 100097, ChinaAgricultural College, Nanjing Agricultural University, Nanjing 210095, ChinaHigh-throughput phenotyping technologies have become an increasingly important topic of crop science in recent years. Various sensors and data acquisition approaches have been applied to acquire the phenotyping traits. It is quite confusing for crop phenotyping researchers to determine an appropriate way for their application. In this study, three representative three-dimensional (3D) data acquisition approaches, including 3D laser scanning, multi-view stereo (MVS) reconstruction, and 3D digitizing, were evaluated for maize plant phenotyping in multi growth stages. Phenotyping traits accuracy, post-processing difficulty, device cost, data acquisition efficiency, and automation were considered during the evaluation process. 3D scanning provided satisfactory point clouds for medium and high maize plants with acceptable efficiency, while the results were not satisfactory for small maize plants. The equipment used in 3D scanning is expensive, but is highly automatic. MVS reconstruction provided satisfactory point clouds for small and medium plants, and point deviations were observed in upper parts of higher plants. MVS data acquisition, using low-cost cameras, exhibited the highest efficiency among the three evaluated approaches. The one-by-one pipeline data acquisition pattern allows the use of MVS high-throughput in further phenotyping platforms. Undoubtedly, enhancement of point cloud processing technologies is required to improve the extracted phenotyping traits accuracy for both 3D scanning and MVS reconstruction. Finally, 3D digitizing was time-consuming and labor intensive. However, it does not depend on any post-processing algorithms to extract phenotyping parameters and reliable phenotyping traits could be derived. The promising accuracy of 3D digitizing is a better verification choice for other 3D phenotyping approaches. Our study provides clear reference about phenotyping data acquisition of maize plants, especially for the affordable and portable field phenotyping platforms to be developed.http://www.mdpi.com/2072-4292/11/1/63maize plantphenotypingthree-dimensional digitizingmulti-view stereothree-dimensional scanningpoint cloud
spellingShingle Yongjian Wang
Weiliang Wen
Sheng Wu
Chuanyu Wang
Zetao Yu
Xinyu Guo
Chunjiang Zhao
Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates
Remote Sensing
maize plant
phenotyping
three-dimensional digitizing
multi-view stereo
three-dimensional scanning
point cloud
title Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates
title_full Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates
title_fullStr Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates
title_full_unstemmed Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates
title_short Maize Plant Phenotyping: Comparing 3D Laser Scanning, Multi-View Stereo Reconstruction, and 3D Digitizing Estimates
title_sort maize plant phenotyping comparing 3d laser scanning multi view stereo reconstruction and 3d digitizing estimates
topic maize plant
phenotyping
three-dimensional digitizing
multi-view stereo
three-dimensional scanning
point cloud
url http://www.mdpi.com/2072-4292/11/1/63
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