Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China
Camellia granthamiana is a wild camellia resource endemic to China and is listed as a Vulnerable species globally. Here, we reported and characterized its complete chloroplast (cp) genome by using Illumina pair-end sequencing data. The total chloroplast genome size was 157,001 bp, including inverted...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1521310 |
| _version_ | 1827774180722999296 |
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| author | Weixi Li Xianggang Shi Wuxia Guo Achyut Kumar Banerjee Qun Zhang Yelin Huang |
| author_facet | Weixi Li Xianggang Shi Wuxia Guo Achyut Kumar Banerjee Qun Zhang Yelin Huang |
| author_sort | Weixi Li |
| collection | DOAJ |
| description | Camellia granthamiana is a wild camellia resource endemic to China and is listed as a Vulnerable species globally. Here, we reported and characterized its complete chloroplast (cp) genome by using Illumina pair-end sequencing data. The total chloroplast genome size was 157,001 bp, including inverted repeats (IRs) of 26,042 bp, separated by a large single copy (LSC) and a small single copy (SSC) of 86,622 and 18,295 bp, respectively. A total of 131 genes, including 36 tRNA, 8 Rrna, and 87 protein-coding genes were identified. Phylogenetic analysis showed that C. granthamiana is sister to C. sinensis with 100% value support. |
| first_indexed | 2024-03-11T13:34:57Z |
| format | Article |
| id | doaj.art-fca87f917de54b3ca6f217a084d757ed |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:57Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-fca87f917de54b3ca6f217a084d757ed2023-11-02T15:57:26ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-01321139114010.1080/23802359.2018.15213101521310Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to ChinaWeixi Li0Xianggang Shi1Wuxia Guo2Achyut Kumar Banerjee3Qun Zhang4Yelin Huang5, Sun Yat-sen University, Sun Yat-sen University, Sun Yat-sen University, Sun Yat-sen University, Jinan University, Sun Yat-sen UniversityCamellia granthamiana is a wild camellia resource endemic to China and is listed as a Vulnerable species globally. Here, we reported and characterized its complete chloroplast (cp) genome by using Illumina pair-end sequencing data. The total chloroplast genome size was 157,001 bp, including inverted repeats (IRs) of 26,042 bp, separated by a large single copy (LSC) and a small single copy (SSC) of 86,622 and 18,295 bp, respectively. A total of 131 genes, including 36 tRNA, 8 Rrna, and 87 protein-coding genes were identified. Phylogenetic analysis showed that C. granthamiana is sister to C. sinensis with 100% value support.http://dx.doi.org/10.1080/23802359.2018.1521310camellia granthamianatheaceaecomplete chloroplast genomevulnerable speciesphylogenomic analysis |
| spellingShingle | Weixi Li Xianggang Shi Wuxia Guo Achyut Kumar Banerjee Qun Zhang Yelin Huang Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China Mitochondrial DNA. Part B. Resources camellia granthamiana theaceae complete chloroplast genome vulnerable species phylogenomic analysis |
| title | Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China |
| title_full | Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China |
| title_fullStr | Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China |
| title_full_unstemmed | Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China |
| title_short | Characterization of the complete chloroplast genome of Camellia granthamiana (Theaceae), a Vulnerable species endemic to China |
| title_sort | characterization of the complete chloroplast genome of camellia granthamiana theaceae a vulnerable species endemic to china |
| topic | camellia granthamiana theaceae complete chloroplast genome vulnerable species phylogenomic analysis |
| url | http://dx.doi.org/10.1080/23802359.2018.1521310 |
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