Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene
This is the first study on phylogenetic relationships in the genus Artemia Leach, 1819 using the pattern and sequence of secondary structures of internal transcribed spacer 1 (ITS1). Significant intraspecific variation in the secondary structure of ITS1 rRNA was found in Artemia tibetiana. In the ph...
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| Format: | Article |
| Language: | English |
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University of Mazandaran
2018-09-01
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| Series: | Journal of Genetic Resources |
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| Online Access: | http://sc.journals.umz.ac.ir/article_2056_0d51eddc39b88996965b960720e91a5b.pdf |
| _version_ | 1818454255530409984 |
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| author | Alireza Asem Pu Wang Shi-Chun Sun |
| author_facet | Alireza Asem Pu Wang Shi-Chun Sun |
| author_sort | Alireza Asem |
| collection | DOAJ |
| description | This is the first study on phylogenetic relationships in the genus Artemia Leach, 1819 using the pattern and sequence of secondary structures of internal transcribed spacer 1 (ITS1). Significant intraspecific variation in the secondary structure of ITS1 rRNA was found in Artemia tibetiana. In the phylogenetic tree based on joined primary and secondary structure sequences, Artemia urmiana and parthenogenetic populations displayed new lineages, and two New World species (Artemia franciscana and Artemia persimilis) were located in a basal clade that was not detected in previous studies. The close evolutionary relationship between A. franciscana and A. persimilis are expressively supported by the previous empirical and experimental investigation on the ability of hybridization (in natural habitats and lab conditions) and analysis on allozyme markers. |
| first_indexed | 2024-12-14T21:51:59Z |
| format | Article |
| id | doaj.art-fe1f71be86e148a9b868dc9fb59f1473 |
| institution | Directory Open Access Journal |
| issn | 2423-4257 2588-2589 |
| language | English |
| last_indexed | 2024-12-14T21:51:59Z |
| publishDate | 2018-09-01 |
| publisher | University of Mazandaran |
| record_format | Article |
| series | Journal of Genetic Resources |
| spelling | doaj.art-fe1f71be86e148a9b868dc9fb59f14732022-12-21T22:46:14ZengUniversity of MazandaranJournal of Genetic Resources2423-42572588-25892018-09-0142728410.22080/jgr.2018.14623.11092056Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 GeneAlireza Asem0Pu Wang1Shi-Chun Sun2College of Life Sciences and Ecology, Hainan Tropical Ocean University, Yucai Rd, Sanya 572000, ChinaDepartment of Ecology, Evolution and Behavior, University of Minnesota, MN 55108, USAInstitute of Evolution and Marine Biodiversity, Ocean University of China, 5 Yushan Road, Qingdao 266003, ChinaThis is the first study on phylogenetic relationships in the genus Artemia Leach, 1819 using the pattern and sequence of secondary structures of internal transcribed spacer 1 (ITS1). Significant intraspecific variation in the secondary structure of ITS1 rRNA was found in Artemia tibetiana. In the phylogenetic tree based on joined primary and secondary structure sequences, Artemia urmiana and parthenogenetic populations displayed new lineages, and two New World species (Artemia franciscana and Artemia persimilis) were located in a basal clade that was not detected in previous studies. The close evolutionary relationship between A. franciscana and A. persimilis are expressively supported by the previous empirical and experimental investigation on the ability of hybridization (in natural habitats and lab conditions) and analysis on allozyme markers.http://sc.journals.umz.ac.ir/article_2056_0d51eddc39b88996965b960720e91a5b.pdfphylogeneticprimary sequencesecondary structuresinternal transcribed spacer 1artemia |
| spellingShingle | Alireza Asem Pu Wang Shi-Chun Sun Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene Journal of Genetic Resources phylogenetic primary sequence secondary structures internal transcribed spacer 1 artemia |
| title | Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene |
| title_full | Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene |
| title_fullStr | Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene |
| title_full_unstemmed | Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene |
| title_short | Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene |
| title_sort | comparative phylogenetic perspectives on the evolutionary relationships in the brine shrimp artemia leach 1819 crustacea anostraca based on secondary structure of its1 gene |
| topic | phylogenetic primary sequence secondary structures internal transcribed spacer 1 artemia |
| url | http://sc.journals.umz.ac.ir/article_2056_0d51eddc39b88996965b960720e91a5b.pdf |
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