Electrical detection of RNA cancer biomarkers at the single-molecule level

Abstract Cancer is a significant healthcare issue, and early screening methods based on biomarker analysis in liquid biopsies are promising avenues to reduce mortality rates. Electrical detection of nucleic acids at the single molecule level could enable these applications. We examine the electrical...

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Main Authors: Keshani G. Gunasinghe Pattiya Arachchillage, Subrata Chandra, Ajoke Williams, Patrick Piscitelli, Jennifer Pham, Aderlyn Castillo, Lily Florence, Srijith Rangan, Juan M. Artes Vivancos
Format: Article
Language:English
Published: Nature Portfolio 2023-08-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-023-39450-6
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author Keshani G. Gunasinghe Pattiya Arachchillage
Subrata Chandra
Ajoke Williams
Patrick Piscitelli
Jennifer Pham
Aderlyn Castillo
Lily Florence
Srijith Rangan
Juan M. Artes Vivancos
author_facet Keshani G. Gunasinghe Pattiya Arachchillage
Subrata Chandra
Ajoke Williams
Patrick Piscitelli
Jennifer Pham
Aderlyn Castillo
Lily Florence
Srijith Rangan
Juan M. Artes Vivancos
author_sort Keshani G. Gunasinghe Pattiya Arachchillage
collection DOAJ
description Abstract Cancer is a significant healthcare issue, and early screening methods based on biomarker analysis in liquid biopsies are promising avenues to reduce mortality rates. Electrical detection of nucleic acids at the single molecule level could enable these applications. We examine the electrical detection of RNA cancer biomarkers (KRAS mutants G12C and G12V) as a single-molecule proof-of-concept electrical biosensor for cancer screening applications. We show that the electrical conductance is highly sensitive to the sequence, allowing discrimination of the mutants from a wild-type KRAS sequence differing in just one base. In addition to this high specificity, our results also show that these biosensors are sensitive down to an individual molecule with a high signal-to-noise ratio. These results pave the way for future miniaturized single-molecule electrical biosensors that could be groundbreaking for cancer screening and other applications.
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spelling doaj.art-fe32081483bd485ba3a75a85b528a8112023-08-06T11:14:38ZengNature PortfolioScientific Reports2045-23222023-08-011311810.1038/s41598-023-39450-6Electrical detection of RNA cancer biomarkers at the single-molecule levelKeshani G. Gunasinghe Pattiya Arachchillage0Subrata Chandra1Ajoke Williams2Patrick Piscitelli3Jennifer Pham4Aderlyn Castillo5Lily Florence6Srijith Rangan7Juan M. Artes Vivancos8Department of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellDepartment of Chemistry, University of Massachusetts LowellAbstract Cancer is a significant healthcare issue, and early screening methods based on biomarker analysis in liquid biopsies are promising avenues to reduce mortality rates. Electrical detection of nucleic acids at the single molecule level could enable these applications. We examine the electrical detection of RNA cancer biomarkers (KRAS mutants G12C and G12V) as a single-molecule proof-of-concept electrical biosensor for cancer screening applications. We show that the electrical conductance is highly sensitive to the sequence, allowing discrimination of the mutants from a wild-type KRAS sequence differing in just one base. In addition to this high specificity, our results also show that these biosensors are sensitive down to an individual molecule with a high signal-to-noise ratio. These results pave the way for future miniaturized single-molecule electrical biosensors that could be groundbreaking for cancer screening and other applications.https://doi.org/10.1038/s41598-023-39450-6
spellingShingle Keshani G. Gunasinghe Pattiya Arachchillage
Subrata Chandra
Ajoke Williams
Patrick Piscitelli
Jennifer Pham
Aderlyn Castillo
Lily Florence
Srijith Rangan
Juan M. Artes Vivancos
Electrical detection of RNA cancer biomarkers at the single-molecule level
Scientific Reports
title Electrical detection of RNA cancer biomarkers at the single-molecule level
title_full Electrical detection of RNA cancer biomarkers at the single-molecule level
title_fullStr Electrical detection of RNA cancer biomarkers at the single-molecule level
title_full_unstemmed Electrical detection of RNA cancer biomarkers at the single-molecule level
title_short Electrical detection of RNA cancer biomarkers at the single-molecule level
title_sort electrical detection of rna cancer biomarkers at the single molecule level
url https://doi.org/10.1038/s41598-023-39450-6
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