Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli

Microbial proteases play pivotal roles in many aspects of bacterial physiological processes. Because a protease exerts its biological function by proteolytically regulating its substrates, the identification and characterization of the physiological substrates of a protease advance our understanding...

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Main Authors: Po-Chuen Hsu, Chien-Sheng Chen, Shuying Wang, Masayuki Hashimoto, Wen-Chun Huang, Ching-Hao Teng
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-08-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.02000/full
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author Po-Chuen Hsu
Chien-Sheng Chen
Shuying Wang
Shuying Wang
Shuying Wang
Shuying Wang
Masayuki Hashimoto
Masayuki Hashimoto
Masayuki Hashimoto
Wen-Chun Huang
Wen-Chun Huang
Ching-Hao Teng
Ching-Hao Teng
Ching-Hao Teng
author_facet Po-Chuen Hsu
Chien-Sheng Chen
Shuying Wang
Shuying Wang
Shuying Wang
Shuying Wang
Masayuki Hashimoto
Masayuki Hashimoto
Masayuki Hashimoto
Wen-Chun Huang
Wen-Chun Huang
Ching-Hao Teng
Ching-Hao Teng
Ching-Hao Teng
author_sort Po-Chuen Hsu
collection DOAJ
description Microbial proteases play pivotal roles in many aspects of bacterial physiological processes. Because a protease exerts its biological function by proteolytically regulating its substrates, the identification and characterization of the physiological substrates of a protease advance our understanding of the biological roles of the protease. Prc (also named Tsp) is an Escherichia coli periplasmic protease thought to be indispensable for E. coli to survive under low osmolality at 42°C. The accumulation of the Prc substrate MepS due to Prc deficiency contributes to the conditional growth defect. Because preventing MepS accumulation only partially restored the growth of Prc-deficient E. coli, we hypothesized that other unidentified Prc substrates intracellularly accumulate due to Prc deficiency and contribute to the conditional growth defect. To identify previously undiscovered substrates, 85 E. coli proteins able to physically interact with Prc were identified using E. coli proteome arrays. Ten proteins were shown to be cleavable by Prc in vitro. Among these candidates, MltG was able to interact with Prc in E. coli. Prc regulated the intracellular level of MltG, indicating that MltG is a physiological substrate of Prc. Prc deficiency induced the accumulation of MltG in the bacteria. Blocking MltG accumulation by deleting mltG partially restored the growth of Prc-deficient E. coli. In addition, Prc-deficient E. coli with blocked MltG and MepS expression exhibited higher growth levels than those with only the MltG or MepS expression blocked under low osmolality at 42°C, suggesting that these accumulated substrates additively contributed to the conditional growth defect. MltG is a lytic transglycosylase involved in the biogenesis of peptidoglycan (PG). In addition to MltG, the previously identified physiological Prc substrates MepS and PBP3 are involved in PG biogenesis, suggesting a potential role of Prc in regulating PG biogenesis.
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spelling doaj.art-fec51519ee264bd6a626d65aa92a9a1c2022-12-22T00:48:15ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-08-011110.3389/fmicb.2020.02000507231Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coliPo-Chuen Hsu0Chien-Sheng Chen1Shuying Wang2Shuying Wang3Shuying Wang4Shuying Wang5Masayuki Hashimoto6Masayuki Hashimoto7Masayuki Hashimoto8Wen-Chun Huang9Wen-Chun Huang10Ching-Hao Teng11Ching-Hao Teng12Ching-Hao Teng13Institute of Molecular Medicine, College of Medicine, National Cheng Kung University, Tainan, TaiwanDepartment of Food Safety/Hygiene and Risk Management, College of Medicine, National Cheng Kung University, Tainan, TaiwanDepartment of Microbiology and Immunology, College of Medicine, National Cheng Kung University, Tainan, TaiwanInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, TaiwanCenter of Infectious Disease and Signaling Research, National Cheng Kung University, Tainan, TaiwanDepartment of Biotechnology and Bioindustry Sciences, College of Bioscience and Biotechnology, National Cheng Kung University, Tainan, TaiwanInstitute of Molecular Medicine, College of Medicine, National Cheng Kung University, Tainan, TaiwanInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, TaiwanCenter of Infectious Disease and Signaling Research, National Cheng Kung University, Tainan, TaiwanInstitute of Molecular Medicine, College of Medicine, National Cheng Kung University, Tainan, TaiwanInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, TaiwanInstitute of Molecular Medicine, College of Medicine, National Cheng Kung University, Tainan, TaiwanInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, TaiwanCenter of Infectious Disease and Signaling Research, National Cheng Kung University, Tainan, TaiwanMicrobial proteases play pivotal roles in many aspects of bacterial physiological processes. Because a protease exerts its biological function by proteolytically regulating its substrates, the identification and characterization of the physiological substrates of a protease advance our understanding of the biological roles of the protease. Prc (also named Tsp) is an Escherichia coli periplasmic protease thought to be indispensable for E. coli to survive under low osmolality at 42°C. The accumulation of the Prc substrate MepS due to Prc deficiency contributes to the conditional growth defect. Because preventing MepS accumulation only partially restored the growth of Prc-deficient E. coli, we hypothesized that other unidentified Prc substrates intracellularly accumulate due to Prc deficiency and contribute to the conditional growth defect. To identify previously undiscovered substrates, 85 E. coli proteins able to physically interact with Prc were identified using E. coli proteome arrays. Ten proteins were shown to be cleavable by Prc in vitro. Among these candidates, MltG was able to interact with Prc in E. coli. Prc regulated the intracellular level of MltG, indicating that MltG is a physiological substrate of Prc. Prc deficiency induced the accumulation of MltG in the bacteria. Blocking MltG accumulation by deleting mltG partially restored the growth of Prc-deficient E. coli. In addition, Prc-deficient E. coli with blocked MltG and MepS expression exhibited higher growth levels than those with only the MltG or MepS expression blocked under low osmolality at 42°C, suggesting that these accumulated substrates additively contributed to the conditional growth defect. MltG is a lytic transglycosylase involved in the biogenesis of peptidoglycan (PG). In addition to MltG, the previously identified physiological Prc substrates MepS and PBP3 are involved in PG biogenesis, suggesting a potential role of Prc in regulating PG biogenesis.https://www.frontiersin.org/article/10.3389/fmicb.2020.02000/fullPrcTspMltGYceGMepSSpr
spellingShingle Po-Chuen Hsu
Chien-Sheng Chen
Shuying Wang
Shuying Wang
Shuying Wang
Shuying Wang
Masayuki Hashimoto
Masayuki Hashimoto
Masayuki Hashimoto
Wen-Chun Huang
Wen-Chun Huang
Ching-Hao Teng
Ching-Hao Teng
Ching-Hao Teng
Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli
Frontiers in Microbiology
Prc
Tsp
MltG
YceG
MepS
Spr
title Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli
title_full Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli
title_fullStr Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli
title_full_unstemmed Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli
title_short Identification of MltG as a Prc Protease Substrate Whose Dysregulation Contributes to the Conditional Growth Defect of Prc-Deficient Escherichia coli
title_sort identification of mltg as a prc protease substrate whose dysregulation contributes to the conditional growth defect of prc deficient escherichia coli
topic Prc
Tsp
MltG
YceG
MepS
Spr
url https://www.frontiersin.org/article/10.3389/fmicb.2020.02000/full
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