Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis
Homalocladium platycladum is a fascinating ornamental plant that has long been used in Chinese medicine. Here, we characterize the complete chloroplast genome sequence of this plant (GenBank: NC_062330). This circular genome has a total length of 163,202 bp containing a large single-copy region (87,...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2122883 |
| _version_ | 1827772137369239552 |
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| author | Zijie Chen Qingxiang Fu Changrui Tai Wei Zhai Kai Zhao |
| author_facet | Zijie Chen Qingxiang Fu Changrui Tai Wei Zhai Kai Zhao |
| author_sort | Zijie Chen |
| collection | DOAJ |
| description | Homalocladium platycladum is a fascinating ornamental plant that has long been used in Chinese medicine. Here, we characterize the complete chloroplast genome sequence of this plant (GenBank: NC_062330). This circular genome has a total length of 163,202 bp containing a large single-copy region (87,820bp), a small single-copy region (13,538bp), and a pair of inverted repeat regions (30,922bp). A total of 130 predicted genes were identified, including 85 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes. Phylogenetic analysis demonstrated that H. platycladum belongs to the Polygonaceae family and is highly analogous with Homalocladium and Muehlenbeckia families. |
| first_indexed | 2024-03-11T13:05:08Z |
| format | Article |
| id | doaj.art-fedfb9ec1c514329abf4073a97f0d705 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:08Z |
| publishDate | 2022-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-fedfb9ec1c514329abf4073a97f0d7052023-11-03T14:44:05ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-09-01791691169310.1080/23802359.2022.21228832122883Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysisZijie Chen0Qingxiang Fu1Changrui Tai2Wei Zhai3Kai Zhao4College of Life Sciences, Anqing Normal UniversityCollege of Life Sciences, Anqing Normal UniversityCollege of Life Sciences, Anqing Normal UniversityCollege of Life Sciences, Anqing Normal UniversityCollege of Life Sciences, Anqing Normal UniversityHomalocladium platycladum is a fascinating ornamental plant that has long been used in Chinese medicine. Here, we characterize the complete chloroplast genome sequence of this plant (GenBank: NC_062330). This circular genome has a total length of 163,202 bp containing a large single-copy region (87,820bp), a small single-copy region (13,538bp), and a pair of inverted repeat regions (30,922bp). A total of 130 predicted genes were identified, including 85 protein-coding genes, 37 transfer RNA genes, and 8 ribosomal RNA genes. Phylogenetic analysis demonstrated that H. platycladum belongs to the Polygonaceae family and is highly analogous with Homalocladium and Muehlenbeckia families.http://dx.doi.org/10.1080/23802359.2022.2122883homalocladium platycladumpolygonaceaechloroplast genomephylogenetic analysis |
| spellingShingle | Zijie Chen Qingxiang Fu Changrui Tai Wei Zhai Kai Zhao Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis Mitochondrial DNA. Part B. Resources homalocladium platycladum polygonaceae chloroplast genome phylogenetic analysis |
| title | Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis |
| title_full | Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis |
| title_fullStr | Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis |
| title_full_unstemmed | Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis |
| title_short | Characterization of the complete chloroplast genome of Homalocladium platycladum (Polygonaceae) and its phylogenetic analysis |
| title_sort | characterization of the complete chloroplast genome of homalocladium platycladum polygonaceae and its phylogenetic analysis |
| topic | homalocladium platycladum polygonaceae chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2122883 |
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