The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae)
Endiandra hainanensis Merr. et Metc. ex Allen is a woody plant belonging to the genus Endiandra R. Brown Prodr, in the family Lauraceae. To better determine its phylogenetic location with respect to the other Endiandra species, the complete plastid genome of E. hainanensis was sequenced. The whole p...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1788453 |
| _version_ | 1797639186732285952 |
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| author | Lina Dou |
| author_facet | Lina Dou |
| author_sort | Lina Dou |
| collection | DOAJ |
| description | Endiandra hainanensis Merr. et Metc. ex Allen is a woody plant belonging to the genus Endiandra R. Brown Prodr, in the family Lauraceae. To better determine its phylogenetic location with respect to the other Endiandra species, the complete plastid genome of E. hainanensis was sequenced. The whole plastome size is 158,558 bp that includes a pair of inverted repeat (IR) regions of 25,513 bp, one large single-copy (LSC) region of 89,285 bp, and one small single-copy (SSC) region of 18,247 bp. The overall GC content of the whole plastome is 39.04%. Maximum likelihood phylogenetic analysis with TVM + F + R2 model was conducted using 20 complete plastomes of the Lauraceae, which supports the close relationship between E. hainanensis and E. dolichocarpa. |
| first_indexed | 2024-03-11T13:13:15Z |
| format | Article |
| id | doaj.art-feff2cd0243d426ca91cd6a8c2d71218 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:15Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-feff2cd0243d426ca91cd6a8c2d712182023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532770277110.1080/23802359.2020.17884531788453The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae)Lina Dou0CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesEndiandra hainanensis Merr. et Metc. ex Allen is a woody plant belonging to the genus Endiandra R. Brown Prodr, in the family Lauraceae. To better determine its phylogenetic location with respect to the other Endiandra species, the complete plastid genome of E. hainanensis was sequenced. The whole plastome size is 158,558 bp that includes a pair of inverted repeat (IR) regions of 25,513 bp, one large single-copy (LSC) region of 89,285 bp, and one small single-copy (SSC) region of 18,247 bp. The overall GC content of the whole plastome is 39.04%. Maximum likelihood phylogenetic analysis with TVM + F + R2 model was conducted using 20 complete plastomes of the Lauraceae, which supports the close relationship between E. hainanensis and E. dolichocarpa.http://dx.doi.org/10.1080/23802359.2020.1788453endiandra hainanensischloroplast genomephylogenetic analysis |
| spellingShingle | Lina Dou The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae) Mitochondrial DNA. Part B. Resources endiandra hainanensis chloroplast genome phylogenetic analysis |
| title | The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae) |
| title_full | The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae) |
| title_fullStr | The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae) |
| title_full_unstemmed | The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae) |
| title_short | The plastid genome of a tropical tree Endiandra hainanensis (Lauraceae) |
| title_sort | plastid genome of a tropical tree endiandra hainanensis lauraceae |
| topic | endiandra hainanensis chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1788453 |
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