A Database of Gene Expression Profiles of Korean Cancer Genome
Because there are clear molecular differences entailing different treatment effectiveness between Korean and non-Korean cancer patients, identifying distinct molecular characteristics of Korean cancers is profoundly important. Here, we report a web-based data repository, namely Korean Cancer Genome...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Korea Genome Organization
2015-09-01
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| Series: | Genomics & Informatics |
| Subjects: | |
| Online Access: | http://genominfo.org/upload/pdf/gni-13-86.pdf |
| _version_ | 1811301609375793152 |
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| author | Seon-Kyu Kim In-Sun Chu |
| author_facet | Seon-Kyu Kim In-Sun Chu |
| author_sort | Seon-Kyu Kim |
| collection | DOAJ |
| description | Because there are clear molecular differences entailing different treatment effectiveness between Korean and non-Korean cancer patients, identifying distinct molecular characteristics of Korean cancers is profoundly important. Here, we report a web-based data repository, namely Korean Cancer Genome Database (KCGD), for searching gene signatures associated with Korean cancer patients. Currently, a total of 1,403 cancer genomics data were collected, processed and stored in our repository, an ever-growing database. We incorporated most widely used statistical survival analysis methods including the Cox proportional hazard model, log-rank test and Kaplan-Meier plot to provide instant significance estimation for searched molecules. As an initial repository with the aim of Korean-specific marker detection, KCGD would be a promising web application for users without bioinformatics expertise to identify significant factors associated with cancer in Korean. |
| first_indexed | 2024-04-13T07:11:52Z |
| format | Article |
| id | doaj.art-ff2ec338974e44df95ee094d8bc5f81c |
| institution | Directory Open Access Journal |
| issn | 1598-866X 2234-0742 |
| language | English |
| last_indexed | 2024-04-13T07:11:52Z |
| publishDate | 2015-09-01 |
| publisher | Korea Genome Organization |
| record_format | Article |
| series | Genomics & Informatics |
| spelling | doaj.art-ff2ec338974e44df95ee094d8bc5f81c2022-12-22T02:56:51ZengKorea Genome OrganizationGenomics & Informatics1598-866X2234-07422015-09-01133868910.5808/GI.2015.13.3.86158A Database of Gene Expression Profiles of Korean Cancer GenomeSeon-Kyu Kim0In-Sun Chu1Medical Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 34141, Korea.Korean Bioinformation Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 34141, Korea.Because there are clear molecular differences entailing different treatment effectiveness between Korean and non-Korean cancer patients, identifying distinct molecular characteristics of Korean cancers is profoundly important. Here, we report a web-based data repository, namely Korean Cancer Genome Database (KCGD), for searching gene signatures associated with Korean cancer patients. Currently, a total of 1,403 cancer genomics data were collected, processed and stored in our repository, an ever-growing database. We incorporated most widely used statistical survival analysis methods including the Cox proportional hazard model, log-rank test and Kaplan-Meier plot to provide instant significance estimation for searched molecules. As an initial repository with the aim of Korean-specific marker detection, KCGD would be a promising web application for users without bioinformatics expertise to identify significant factors associated with cancer in Korean.http://genominfo.org/upload/pdf/gni-13-86.pdfbiological markersdatabasegenomicsKoreanneoplasmsprognosis |
| spellingShingle | Seon-Kyu Kim In-Sun Chu A Database of Gene Expression Profiles of Korean Cancer Genome Genomics & Informatics biological markers database genomics Korean neoplasms prognosis |
| title | A Database of Gene Expression Profiles of Korean Cancer Genome |
| title_full | A Database of Gene Expression Profiles of Korean Cancer Genome |
| title_fullStr | A Database of Gene Expression Profiles of Korean Cancer Genome |
| title_full_unstemmed | A Database of Gene Expression Profiles of Korean Cancer Genome |
| title_short | A Database of Gene Expression Profiles of Korean Cancer Genome |
| title_sort | database of gene expression profiles of korean cancer genome |
| topic | biological markers database genomics Korean neoplasms prognosis |
| url | http://genominfo.org/upload/pdf/gni-13-86.pdf |
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