The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering
The complete chloroplast genome of Catalpa ‘Bairihua’ a hybrid variety with multi season flowering obtained from hybrid progeny of C. bungei ‘Luoqiu Sihao’ (C. bungei ‘01’ × C. bungei ‘Changguo Qiu’) and C. fargesii f. duclouxii was first sequenced with the Illumina HiSeq 2000 platform. Which was 15...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1788445 |
| _version_ | 1827772818382651392 |
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| author | Wen-Qing Li Yi-Zeng Lu Xiao-Man Xie Yi Han Ning Wang Tao Sun Li-Jiang Liu Yan Wang Zhen-Jie Zhuang Guang-Chen Gao Tao Liu Li-Jun Zhao |
| author_facet | Wen-Qing Li Yi-Zeng Lu Xiao-Man Xie Yi Han Ning Wang Tao Sun Li-Jiang Liu Yan Wang Zhen-Jie Zhuang Guang-Chen Gao Tao Liu Li-Jun Zhao |
| author_sort | Wen-Qing Li |
| collection | DOAJ |
| description | The complete chloroplast genome of Catalpa ‘Bairihua’ a hybrid variety with multi season flowering obtained from hybrid progeny of C. bungei ‘Luoqiu Sihao’ (C. bungei ‘01’ × C. bungei ‘Changguo Qiu’) and C. fargesii f. duclouxii was first sequenced with the Illumina HiSeq 2000 platform. Which was 158,210 bp in length with a typical quadruple structure and contained a large single copy (LSC: 84,928 bp) region and a small single copy (SSC: 12,664 bp) region that were separated by a pair of inverted repeats (IRa, b: 30,309 bp) region. The GC content of the whole chloroplast genome is 38.1%. A total of 130 genes was annotated in the complete chloroplast genome, including 85 protein-coding genes, 37 tRNA genes and 8rRNA genes. ML phylogenetic analysis by comparing with 39 chloroplast genomes of the Bignoniaceae indicated that Catalpa ‘Bairihua’ was close to Tecomaria capensis. |
| first_indexed | 2024-03-11T13:13:15Z |
| format | Article |
| id | doaj.art-ff7d735969be4bf282af2b6e52a868fd |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:15Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-ff7d735969be4bf282af2b6e52a868fd2023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532760276210.1080/23802359.2020.17884451788445The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season floweringWen-Qing Li0Yi-Zeng Lu1Xiao-Man Xie2Yi Han3Ning Wang4Tao Sun5Li-Jiang Liu6Yan Wang7Zhen-Jie Zhuang8Guang-Chen Gao9Tao Liu10Li-Jun Zhao11Shandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesShandong Provincial Center of Forest Tree Germplasm ResourcesThe complete chloroplast genome of Catalpa ‘Bairihua’ a hybrid variety with multi season flowering obtained from hybrid progeny of C. bungei ‘Luoqiu Sihao’ (C. bungei ‘01’ × C. bungei ‘Changguo Qiu’) and C. fargesii f. duclouxii was first sequenced with the Illumina HiSeq 2000 platform. Which was 158,210 bp in length with a typical quadruple structure and contained a large single copy (LSC: 84,928 bp) region and a small single copy (SSC: 12,664 bp) region that were separated by a pair of inverted repeats (IRa, b: 30,309 bp) region. The GC content of the whole chloroplast genome is 38.1%. A total of 130 genes was annotated in the complete chloroplast genome, including 85 protein-coding genes, 37 tRNA genes and 8rRNA genes. ML phylogenetic analysis by comparing with 39 chloroplast genomes of the Bignoniaceae indicated that Catalpa ‘Bairihua’ was close to Tecomaria capensis.http://dx.doi.org/10.1080/23802359.2020.1788445catalpa ‘bairihua’chloroplast genomephylogeny |
| spellingShingle | Wen-Qing Li Yi-Zeng Lu Xiao-Man Xie Yi Han Ning Wang Tao Sun Li-Jiang Liu Yan Wang Zhen-Jie Zhuang Guang-Chen Gao Tao Liu Li-Jun Zhao The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering Mitochondrial DNA. Part B. Resources catalpa ‘bairihua’ chloroplast genome phylogeny |
| title | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
| title_full | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
| title_fullStr | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
| title_full_unstemmed | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
| title_short | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
| title_sort | complete chloroplast genome of catalpa bairihua a hybrid variety with multi season flowering |
| topic | catalpa ‘bairihua’ chloroplast genome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2020.1788445 |
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