Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea

We determined and annotated the whole mtDNA genome of the roe deer Capreolus pygargus tianschanicus in Korea. The complete mitogenome is a circular molecule of 16,357 bp in length, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions (L-strand rep...

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Main Authors: Hye Ri Kim, Mi Gyeong Jeon, Ji Hong Min, Hyun Ju Kim, Yung Chul Park
Format: Article
Language:English
Published: Taylor & Francis Group 2017-12-01
Series:Mitochondrial DNA. Part B. Resources
Subjects:
Online Access:http://dx.doi.org/10.1080/23802359.2017.1365645
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author Hye Ri Kim
Mi Gyeong Jeon
Ji Hong Min
Hyun Ju Kim
Yung Chul Park
author_facet Hye Ri Kim
Mi Gyeong Jeon
Ji Hong Min
Hyun Ju Kim
Yung Chul Park
author_sort Hye Ri Kim
collection DOAJ
description We determined and annotated the whole mtDNA genome of the roe deer Capreolus pygargus tianschanicus in Korea. The complete mitogenome is a circular molecule of 16,357 bp in length, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions (L-strand replication origin and control region). The mitogenome is AT-biased, with a nucleotide composition of 33.5% A, 30.0% T, 23.2% C, and 13.4% G. The phylogenetic analysis revealed the Korean roe deer C. p. tianschanicus is placed within the genus Caprelous clade, which has the water deer of the genus Hydropotes as sister clade.
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spelling doaj.art-ff804e284e8a43a5a53768a9d5341f012023-11-02T15:42:57ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592017-12-012255855910.1080/23802359.2017.13656451365645Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from KoreaHye Ri Kim0Mi Gyeong Jeon1Ji Hong Min2Hyun Ju Kim3Yung Chul Park4National Park Research Institute, Korea National Park ServiceNational Park Research Institute, Korea National Park ServiceCollege of Forest & Environmental Sciences, Kangwon National UniversityNational Institute of Agricultural Sciences, Rural Development AdministrationCollege of Forest & Environmental Sciences, Kangwon National UniversityWe determined and annotated the whole mtDNA genome of the roe deer Capreolus pygargus tianschanicus in Korea. The complete mitogenome is a circular molecule of 16,357 bp in length, including 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 2 non-coding regions (L-strand replication origin and control region). The mitogenome is AT-biased, with a nucleotide composition of 33.5% A, 30.0% T, 23.2% C, and 13.4% G. The phylogenetic analysis revealed the Korean roe deer C. p. tianschanicus is placed within the genus Caprelous clade, which has the water deer of the genus Hydropotes as sister clade.http://dx.doi.org/10.1080/23802359.2017.1365645mitogenomeroe deercapreolus pygarguscervidae
spellingShingle Hye Ri Kim
Mi Gyeong Jeon
Ji Hong Min
Hyun Ju Kim
Yung Chul Park
Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea
Mitochondrial DNA. Part B. Resources
mitogenome
roe deer
capreolus pygargus
cervidae
title Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea
title_full Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea
title_fullStr Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea
title_full_unstemmed Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea
title_short Complete mitochondrial genome of the roe deer Capreolus pygargus tianschanicus (Cervidae) from Korea
title_sort complete mitochondrial genome of the roe deer capreolus pygargus tianschanicus cervidae from korea
topic mitogenome
roe deer
capreolus pygargus
cervidae
url http://dx.doi.org/10.1080/23802359.2017.1365645
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