Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis
Abstract One of the most common oral carcinomas is oral squamous cell carcinoma (OSCC), bringing a heavy burden to global health. Although progresses have been made in the intervention of OSCC, 5 years survival of patients suffering from OSCC is poor like before regarding to the high invasiveness of...
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| Format: | Article |
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Nature Portfolio
2024-03-01
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| Series: | Scientific Reports |
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| Online Access: | https://doi.org/10.1038/s41598-024-56694-y |
| _version_ | 1797259324575186944 |
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| author | Lu Qi Zhangui Tang |
| author_facet | Lu Qi Zhangui Tang |
| author_sort | Lu Qi |
| collection | DOAJ |
| description | Abstract One of the most common oral carcinomas is oral squamous cell carcinoma (OSCC), bringing a heavy burden to global health. Although progresses have been made in the intervention of OSCC, 5 years survival of patients suffering from OSCC is poor like before regarding to the high invasiveness of OSCC, which causes metastasis and recurrence of the tumor. The relationship between pyroptosis and OSCC remains to be further investigated as pyroptosis in carcinomas has gained much attention. Herein, the key pyroptosis-related genes were identified according to The Cancer Genome Atlas (TCGA) dataset. Additionally, a prognostic model was constructed based upon three key genes (CTLA4, CD5, and IL12RB2) through least absolute shrinkage and selection operator (LASSO) analyses, as well as univariate and multivariate COX regression in OSCC. It was discovered that the high expression of these three genes was associated with the low-risk group. We also identified LAIR2 as a hub gene, whose expression negatively correlated with the risk score and the different immune cell infiltration. Finally, we proved that these three genes were independent prognostic factors linked to overall survival (OS), and reliable consequences could be predicted by this model. Our study revealed the relationship between pyroptosis and OSCC, providing insights into new treatment targets for preventing and treating OSCC. |
| first_indexed | 2024-04-24T23:07:37Z |
| format | Article |
| id | doaj.art-ff839c327c9949fb88afab8c9b1c116f |
| institution | Directory Open Access Journal |
| issn | 2045-2322 |
| language | English |
| last_indexed | 2024-04-24T23:07:37Z |
| publishDate | 2024-03-01 |
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| spelling | doaj.art-ff839c327c9949fb88afab8c9b1c116f2024-03-17T12:25:13ZengNature PortfolioScientific Reports2045-23222024-03-0114111910.1038/s41598-024-56694-yPrognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysisLu Qi0Zhangui Tang1Hunan Key Laboratory of Oral Health Research, Hunan Clinical Research Center of Oral Major Diseases and Oral Health, Xiangya Stomatological Hospital, Xiangya School of Stomatology, Central South UniversityHunan Key Laboratory of Oral Health Research, Hunan Clinical Research Center of Oral Major Diseases and Oral Health, Xiangya Stomatological Hospital, Xiangya School of Stomatology, Central South UniversityAbstract One of the most common oral carcinomas is oral squamous cell carcinoma (OSCC), bringing a heavy burden to global health. Although progresses have been made in the intervention of OSCC, 5 years survival of patients suffering from OSCC is poor like before regarding to the high invasiveness of OSCC, which causes metastasis and recurrence of the tumor. The relationship between pyroptosis and OSCC remains to be further investigated as pyroptosis in carcinomas has gained much attention. Herein, the key pyroptosis-related genes were identified according to The Cancer Genome Atlas (TCGA) dataset. Additionally, a prognostic model was constructed based upon three key genes (CTLA4, CD5, and IL12RB2) through least absolute shrinkage and selection operator (LASSO) analyses, as well as univariate and multivariate COX regression in OSCC. It was discovered that the high expression of these three genes was associated with the low-risk group. We also identified LAIR2 as a hub gene, whose expression negatively correlated with the risk score and the different immune cell infiltration. Finally, we proved that these three genes were independent prognostic factors linked to overall survival (OS), and reliable consequences could be predicted by this model. Our study revealed the relationship between pyroptosis and OSCC, providing insights into new treatment targets for preventing and treating OSCC.https://doi.org/10.1038/s41598-024-56694-yPyroptosisGene enrichment analysisImmune infiltrationPrognosisOral squamous cell carcinoma |
| spellingShingle | Lu Qi Zhangui Tang Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis Scientific Reports Pyroptosis Gene enrichment analysis Immune infiltration Prognosis Oral squamous cell carcinoma |
| title | Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis |
| title_full | Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis |
| title_fullStr | Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis |
| title_full_unstemmed | Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis |
| title_short | Prognostic model revealing pyroptosis-related signatures in oral squamous cell carcinoma based on bioinformatics analysis |
| title_sort | prognostic model revealing pyroptosis related signatures in oral squamous cell carcinoma based on bioinformatics analysis |
| topic | Pyroptosis Gene enrichment analysis Immune infiltration Prognosis Oral squamous cell carcinoma |
| url | https://doi.org/10.1038/s41598-024-56694-y |
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