On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs

<p>Abstract</p> <p>MicroRNAs (miRNAs) are endogenous small non-coding RNAs of about 20–24 nt, known to play key roles in post-transcriptional gene regulation, that can be coded either by intergenic or intragenic loci. Intragenic (exonic and intronic) miRNAs can exert a role in the...

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Main Authors: Colaiacovo Moreno, Lamontanara Antonella, Bernardo Letizia, Alberici Renzo, Crosatti Cristina, Giusti Lorenzo, Cattivelli Luigi, Faccioli Primetta
Format: Article
Language:English
Published: BMC 2012-05-01
Series:Biology Direct
Subjects:
Online Access:http://www.biology-direct.com/content/7/1/15
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author Colaiacovo Moreno
Lamontanara Antonella
Bernardo Letizia
Alberici Renzo
Crosatti Cristina
Giusti Lorenzo
Cattivelli Luigi
Faccioli Primetta
author_facet Colaiacovo Moreno
Lamontanara Antonella
Bernardo Letizia
Alberici Renzo
Crosatti Cristina
Giusti Lorenzo
Cattivelli Luigi
Faccioli Primetta
author_sort Colaiacovo Moreno
collection DOAJ
description <p>Abstract</p> <p>MicroRNAs (miRNAs) are endogenous small non-coding RNAs of about 20–24 nt, known to play key roles in post-transcriptional gene regulation, that can be coded either by intergenic or intragenic loci. Intragenic (exonic and intronic) miRNAs can exert a role in the transcriptional regulation and RNA processing of their host gene. Moreover, the possibility that the biogenesis of exonic miRNAs could destabilize the corresponding protein-coding transcript and reduce protein synthesis makes their characterization very intriguing and suggests a possible novel mechanism of post-transcriptional regulation of gene expression.</p> <p>This work was designed to carry out the computational identification of putative exonic miRNAs in 30 plant species and the analysis of possible mechanisms involved in their regulation.</p> <p>The results obtained represent a useful starting point for future studies on the complex networks involved in microRNA-mediated gene regulation in plants.</p>
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spelling doaj.art-ff84e10dde874de3aaececb3a9eacc0b2022-12-21T22:01:26ZengBMCBiology Direct1745-61502012-05-01711510.1186/1745-6150-7-15On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAsColaiacovo MorenoLamontanara AntonellaBernardo LetiziaAlberici RenzoCrosatti CristinaGiusti LorenzoCattivelli LuigiFaccioli Primetta<p>Abstract</p> <p>MicroRNAs (miRNAs) are endogenous small non-coding RNAs of about 20–24 nt, known to play key roles in post-transcriptional gene regulation, that can be coded either by intergenic or intragenic loci. Intragenic (exonic and intronic) miRNAs can exert a role in the transcriptional regulation and RNA processing of their host gene. Moreover, the possibility that the biogenesis of exonic miRNAs could destabilize the corresponding protein-coding transcript and reduce protein synthesis makes their characterization very intriguing and suggests a possible novel mechanism of post-transcriptional regulation of gene expression.</p> <p>This work was designed to carry out the computational identification of putative exonic miRNAs in 30 plant species and the analysis of possible mechanisms involved in their regulation.</p> <p>The results obtained represent a useful starting point for future studies on the complex networks involved in microRNA-mediated gene regulation in plants.</p>http://www.biology-direct.com/content/7/1/15Gene regulationExonic miRNAmiRNA self regulationPlants
spellingShingle Colaiacovo Moreno
Lamontanara Antonella
Bernardo Letizia
Alberici Renzo
Crosatti Cristina
Giusti Lorenzo
Cattivelli Luigi
Faccioli Primetta
On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs
Biology Direct
Gene regulation
Exonic miRNA
miRNA self regulation
Plants
title On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs
title_full On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs
title_fullStr On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs
title_full_unstemmed On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs
title_short On the complexity of miRNA-mediated regulation in plants: novel insights into the genomic organization of plant miRNAs
title_sort on the complexity of mirna mediated regulation in plants novel insights into the genomic organization of plant mirnas
topic Gene regulation
Exonic miRNA
miRNA self regulation
Plants
url http://www.biology-direct.com/content/7/1/15
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