Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells

Many aptamer-fluorophore complexes suffer from low quantum yield and low extinction coefficients limiting their usability. Here the authors isolate new Mango aptamers with improved fluorescent properties for both fixed and live-cell imaging by using competitive ligand binding microfluidic selection.

Bibliographic Details
Main Authors: Alexis Autour, Sunny C. Y. Jeng, Adam D. Cawte, Amir Abdolahzadeh, Angela Galli, Shanker S. S. Panchapakesan, David Rueda, Michael Ryckelynck, Peter J. Unrau
Format: Article
Language:English
Published: Nature Portfolio 2018-02-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-018-02993-8
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author Alexis Autour
Sunny C. Y. Jeng
Adam D. Cawte
Amir Abdolahzadeh
Angela Galli
Shanker S. S. Panchapakesan
David Rueda
Michael Ryckelynck
Peter J. Unrau
author_facet Alexis Autour
Sunny C. Y. Jeng
Adam D. Cawte
Amir Abdolahzadeh
Angela Galli
Shanker S. S. Panchapakesan
David Rueda
Michael Ryckelynck
Peter J. Unrau
author_sort Alexis Autour
collection DOAJ
description Many aptamer-fluorophore complexes suffer from low quantum yield and low extinction coefficients limiting their usability. Here the authors isolate new Mango aptamers with improved fluorescent properties for both fixed and live-cell imaging by using competitive ligand binding microfluidic selection.
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spelling doaj.art-ffa23cd158524e5b94c7284e2e879efb2022-12-21T20:39:00ZengNature PortfolioNature Communications2041-17232018-02-019111210.1038/s41467-018-02993-8Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cellsAlexis Autour0Sunny C. Y. Jeng1Adam D. Cawte2Amir Abdolahzadeh3Angela Galli4Shanker S. S. Panchapakesan5David Rueda6Michael Ryckelynck7Peter J. Unrau8Université de Strasbourg, CNRS, Architecture et Réactivité de l’ARN, UPR 9002Department of Molecular Biology and Biochemistry, Simon Fraser UniversitySingle Molecule Imaging Group, MRC London Institute of Medical SciencesDepartment of Molecular Biology and Biochemistry, Simon Fraser UniversityDepartment of Molecular Biology and Biochemistry, Simon Fraser UniversityDepartment of Molecular Biology and Biochemistry, Simon Fraser UniversitySingle Molecule Imaging Group, MRC London Institute of Medical SciencesUniversité de Strasbourg, CNRS, Architecture et Réactivité de l’ARN, UPR 9002Department of Molecular Biology and Biochemistry, Simon Fraser UniversityMany aptamer-fluorophore complexes suffer from low quantum yield and low extinction coefficients limiting their usability. Here the authors isolate new Mango aptamers with improved fluorescent properties for both fixed and live-cell imaging by using competitive ligand binding microfluidic selection.https://doi.org/10.1038/s41467-018-02993-8
spellingShingle Alexis Autour
Sunny C. Y. Jeng
Adam D. Cawte
Amir Abdolahzadeh
Angela Galli
Shanker S. S. Panchapakesan
David Rueda
Michael Ryckelynck
Peter J. Unrau
Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
Nature Communications
title Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
title_full Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
title_fullStr Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
title_full_unstemmed Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
title_short Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells
title_sort fluorogenic rna mango aptamers for imaging small non coding rnas in mammalian cells
url https://doi.org/10.1038/s41467-018-02993-8
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