Segmentation of Cerebrovascular Pathologies in Stroke Patients with Spatial and Shape Priors

We propose and demonstrate an inference algorithm for the automatic segmentation of cerebrovascular pathologies in clinical MR images of the brain. Identifying and differentiating pathologies is important for understanding the underlying mechanisms and clinical outcomes of cerebral ischemia. Manual...

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Bibliographic Details
Main Authors: Dalca, Adrian Vasile, Sridharan, Ramesh, Cloonan, Lisa, Fitzpatrick, Kaitlin M., Kanakis, Allison, Furie, Karen L., Rosand, Jonathan, Wu, Ona, Sabuncu, Mert, Rost, Natalia S., Golland, Polina
Other Authors: Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory
Format: Article
Language:en_US
Published: Springer-Verlag 2015
Online Access:http://hdl.handle.net/1721.1/100234
https://orcid.org/0000-0002-8422-0136
https://orcid.org/0000-0003-2516-731X
Description
Summary:We propose and demonstrate an inference algorithm for the automatic segmentation of cerebrovascular pathologies in clinical MR images of the brain. Identifying and differentiating pathologies is important for understanding the underlying mechanisms and clinical outcomes of cerebral ischemia. Manual delineation of separate pathologies is infeasible in large studies of stroke that include thousands of patients. Unlike normal brain tissues and structures, the location and shape of the lesions vary across patients, presenting serious challenges for prior-driven segmentation. Our generative model captures spatial patterns and intensity properties associated with different cerebrovascular pathologies in stroke patients. We demonstrate the resulting segmentation algorithm on clinical images of a stroke patient cohort.