Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming

Understanding the molecular programs that guide differentiation during development is a major challenge. Here, we introduce Waddington-OT, an approach for studying developmental time courses to infer ancestor-descendant fates and model the regulatory programs that underlie them. We apply the method...

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Bibliographic Details
Main Authors: Cleary, Brian Lowman, Lin, Stacie, Jaenisch, Rudolf, Regev, Aviv, Lander, Eric Steven
Other Authors: Massachusetts Institute of Technology. Department of Biology
Format: Article
Language:English
Published: Elsevier BV 2020
Subjects:
Online Access:https://hdl.handle.net/1721.1/124366