Designer broad-spectrum polyimidazolium antibiotics

© 2020 National Academy of Sciences. All rights reserved. For a myriad of different reasons most antimicrobial peptides (AMPs) have failed to reach clinical application. Different AMPs have different shortcomings including but not limited to toxicity issues, potency, limited spectrum of activity, or...

Full description

Bibliographic Details
Main Authors: Zhong, Wenbin, Shi, Zhenyu, Mahadevegowda, Surendra H, Liu, Bo, Zhang, Kaixi, Koh, Chong Hui, Ruan, Lin, Chen, Yahua, Zeden, Merve S, Pee, Carmen JE, Marimuthu, Kalisvar, De, Partha Pratim, Ng, Oon Tek, Zhu, Yabin, Chi, Yonggui Robin, Hammond, Paula T, Yang, Liang, Gan, Yunn-Hwen, Pethe, Kevin, Greenberg, E Peter, Gründling, Angelika, Chan-Park, Mary B
Other Authors: Koch Institute for Integrative Cancer Research at MIT
Format: Article
Language:English
Published: Proceedings of the National Academy of Sciences 2021
Online Access:https://hdl.handle.net/1721.1/133954
_version_ 1811076608208928768
author Zhong, Wenbin
Shi, Zhenyu
Mahadevegowda, Surendra H
Liu, Bo
Zhang, Kaixi
Koh, Chong Hui
Ruan, Lin
Chen, Yahua
Zeden, Merve S
Pee, Carmen JE
Marimuthu, Kalisvar
De, Partha Pratim
Ng, Oon Tek
Zhu, Yabin
Chi, Yonggui Robin
Hammond, Paula T
Yang, Liang
Gan, Yunn-Hwen
Pethe, Kevin
Greenberg, E Peter
Gründling, Angelika
Chan-Park, Mary B
author2 Koch Institute for Integrative Cancer Research at MIT
author_facet Koch Institute for Integrative Cancer Research at MIT
Zhong, Wenbin
Shi, Zhenyu
Mahadevegowda, Surendra H
Liu, Bo
Zhang, Kaixi
Koh, Chong Hui
Ruan, Lin
Chen, Yahua
Zeden, Merve S
Pee, Carmen JE
Marimuthu, Kalisvar
De, Partha Pratim
Ng, Oon Tek
Zhu, Yabin
Chi, Yonggui Robin
Hammond, Paula T
Yang, Liang
Gan, Yunn-Hwen
Pethe, Kevin
Greenberg, E Peter
Gründling, Angelika
Chan-Park, Mary B
author_sort Zhong, Wenbin
collection MIT
description © 2020 National Academy of Sciences. All rights reserved. For a myriad of different reasons most antimicrobial peptides (AMPs) have failed to reach clinical application. Different AMPs have different shortcomings including but not limited to toxicity issues, potency, limited spectrum of activity, or reduced activity in situ. We synthesized several cationic peptide mimics, main-chain cationic polyimidazoliums (PIMs), and discovered that, although select PIMs show little acute mammalian cell toxicity, they are potent broad-spectrum antibiotics with activity against even pan-antibiotic-resistant gram-positive and gram-negative bacteria, and mycobacteria. We selected PIM1, a particularly potent PIM, for mechanistic studies. Our experiments indicate PIM1 binds bacterial cell membranes by hydrophobic and electrostatic interactions, enters cells, and ultimately kills bacteria. Unlike cationic AMPs, such as colistin (CST), PIM1 does not permeabilize cell membranes. We show that a membrane electric potential is required for PIM1 activity. In laboratory evolution experiments with the gram-positive Staphylococcus aureus we obtained PIM1-resistant isolates most of which had menaquinone mutations, and we found that a sitedirected menaquinone mutation also conferred PIM1 resistance. In similar experiments with the gram-negative pathogen Pseudomonas aeruginosa, PIM1-resistant mutants did not emerge. Although PIM1 was efficacious as a topical agent, intraperitoneal administration of PIM1 in mice showed some toxicity. We synthesized a PIM1 derivative, PIM1D, which is less hydrophobic than PIM1. PIM1D did not show evidence of toxicity but retained antibacterial activity and showed efficacy in murine sepsis infections. Our evidence indicates the PIMs have potential as candidates for development of new drugs for treatment of pan-resistant bacterial infections.
first_indexed 2024-09-23T10:24:50Z
format Article
id mit-1721.1/133954
institution Massachusetts Institute of Technology
language English
last_indexed 2024-09-23T10:24:50Z
publishDate 2021
publisher Proceedings of the National Academy of Sciences
record_format dspace
spelling mit-1721.1/1339542023-09-28T20:02:52Z Designer broad-spectrum polyimidazolium antibiotics Zhong, Wenbin Shi, Zhenyu Mahadevegowda, Surendra H Liu, Bo Zhang, Kaixi Koh, Chong Hui Ruan, Lin Chen, Yahua Zeden, Merve S Pee, Carmen JE Marimuthu, Kalisvar De, Partha Pratim Ng, Oon Tek Zhu, Yabin Chi, Yonggui Robin Hammond, Paula T Yang, Liang Gan, Yunn-Hwen Pethe, Kevin Greenberg, E Peter Gründling, Angelika Chan-Park, Mary B Koch Institute for Integrative Cancer Research at MIT Massachusetts Institute of Technology. Department of Chemical Engineering © 2020 National Academy of Sciences. All rights reserved. For a myriad of different reasons most antimicrobial peptides (AMPs) have failed to reach clinical application. Different AMPs have different shortcomings including but not limited to toxicity issues, potency, limited spectrum of activity, or reduced activity in situ. We synthesized several cationic peptide mimics, main-chain cationic polyimidazoliums (PIMs), and discovered that, although select PIMs show little acute mammalian cell toxicity, they are potent broad-spectrum antibiotics with activity against even pan-antibiotic-resistant gram-positive and gram-negative bacteria, and mycobacteria. We selected PIM1, a particularly potent PIM, for mechanistic studies. Our experiments indicate PIM1 binds bacterial cell membranes by hydrophobic and electrostatic interactions, enters cells, and ultimately kills bacteria. Unlike cationic AMPs, such as colistin (CST), PIM1 does not permeabilize cell membranes. We show that a membrane electric potential is required for PIM1 activity. In laboratory evolution experiments with the gram-positive Staphylococcus aureus we obtained PIM1-resistant isolates most of which had menaquinone mutations, and we found that a sitedirected menaquinone mutation also conferred PIM1 resistance. In similar experiments with the gram-negative pathogen Pseudomonas aeruginosa, PIM1-resistant mutants did not emerge. Although PIM1 was efficacious as a topical agent, intraperitoneal administration of PIM1 in mice showed some toxicity. We synthesized a PIM1 derivative, PIM1D, which is less hydrophobic than PIM1. PIM1D did not show evidence of toxicity but retained antibacterial activity and showed efficacy in murine sepsis infections. Our evidence indicates the PIMs have potential as candidates for development of new drugs for treatment of pan-resistant bacterial infections. 2021-10-27T19:57:21Z 2021-10-27T19:57:21Z 2020 2021-06-10T15:46:25Z Article http://purl.org/eprint/type/JournalArticle https://hdl.handle.net/1721.1/133954 en 10.1073/pnas.2011024117 Proceedings of the National Academy of Sciences of the United States of America Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use. application/pdf Proceedings of the National Academy of Sciences PNAS
spellingShingle Zhong, Wenbin
Shi, Zhenyu
Mahadevegowda, Surendra H
Liu, Bo
Zhang, Kaixi
Koh, Chong Hui
Ruan, Lin
Chen, Yahua
Zeden, Merve S
Pee, Carmen JE
Marimuthu, Kalisvar
De, Partha Pratim
Ng, Oon Tek
Zhu, Yabin
Chi, Yonggui Robin
Hammond, Paula T
Yang, Liang
Gan, Yunn-Hwen
Pethe, Kevin
Greenberg, E Peter
Gründling, Angelika
Chan-Park, Mary B
Designer broad-spectrum polyimidazolium antibiotics
title Designer broad-spectrum polyimidazolium antibiotics
title_full Designer broad-spectrum polyimidazolium antibiotics
title_fullStr Designer broad-spectrum polyimidazolium antibiotics
title_full_unstemmed Designer broad-spectrum polyimidazolium antibiotics
title_short Designer broad-spectrum polyimidazolium antibiotics
title_sort designer broad spectrum polyimidazolium antibiotics
url https://hdl.handle.net/1721.1/133954
work_keys_str_mv AT zhongwenbin designerbroadspectrumpolyimidazoliumantibiotics
AT shizhenyu designerbroadspectrumpolyimidazoliumantibiotics
AT mahadevegowdasurendrah designerbroadspectrumpolyimidazoliumantibiotics
AT liubo designerbroadspectrumpolyimidazoliumantibiotics
AT zhangkaixi designerbroadspectrumpolyimidazoliumantibiotics
AT kohchonghui designerbroadspectrumpolyimidazoliumantibiotics
AT ruanlin designerbroadspectrumpolyimidazoliumantibiotics
AT chenyahua designerbroadspectrumpolyimidazoliumantibiotics
AT zedenmerves designerbroadspectrumpolyimidazoliumantibiotics
AT peecarmenje designerbroadspectrumpolyimidazoliumantibiotics
AT marimuthukalisvar designerbroadspectrumpolyimidazoliumantibiotics
AT departhapratim designerbroadspectrumpolyimidazoliumantibiotics
AT ngoontek designerbroadspectrumpolyimidazoliumantibiotics
AT zhuyabin designerbroadspectrumpolyimidazoliumantibiotics
AT chiyongguirobin designerbroadspectrumpolyimidazoliumantibiotics
AT hammondpaulat designerbroadspectrumpolyimidazoliumantibiotics
AT yangliang designerbroadspectrumpolyimidazoliumantibiotics
AT ganyunnhwen designerbroadspectrumpolyimidazoliumantibiotics
AT pethekevin designerbroadspectrumpolyimidazoliumantibiotics
AT greenbergepeter designerbroadspectrumpolyimidazoliumantibiotics
AT grundlingangelika designerbroadspectrumpolyimidazoliumantibiotics
AT chanparkmaryb designerbroadspectrumpolyimidazoliumantibiotics