Cell diversity and network dynamics in photosensitive human brain organoids

© 2017 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. In vitro models of the developing brain such as three-dimensional brain organoids offer an unprecedented opportunity to study aspects of human brain development and disease. However, the cells generated within organoi...

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Main Authors: Quadrato, Giorgia, Nguyen, Tuan, Macosko, Evan Z, Sherwood, John L, Min Yang, Sung, Berger, Daniel R, Maria, Natalie, Scholvin, Jorg, Goldman, Melissa, Kinney, Justin P, Boyden, Edward S, Lichtman, Jeff W, Williams, Ziv M, McCarroll, Steven A, Arlotta, Paola
Other Authors: Massachusetts Institute of Technology. Department of Biological Engineering
Format: Article
Language:English
Published: Springer Science and Business Media LLC 2021
Online Access:https://hdl.handle.net/1721.1/135707
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author Quadrato, Giorgia
Nguyen, Tuan
Macosko, Evan Z
Sherwood, John L
Min Yang, Sung
Berger, Daniel R
Maria, Natalie
Scholvin, Jorg
Goldman, Melissa
Kinney, Justin P
Boyden, Edward S
Lichtman, Jeff W
Williams, Ziv M
McCarroll, Steven A
Arlotta, Paola
author2 Massachusetts Institute of Technology. Department of Biological Engineering
author_facet Massachusetts Institute of Technology. Department of Biological Engineering
Quadrato, Giorgia
Nguyen, Tuan
Macosko, Evan Z
Sherwood, John L
Min Yang, Sung
Berger, Daniel R
Maria, Natalie
Scholvin, Jorg
Goldman, Melissa
Kinney, Justin P
Boyden, Edward S
Lichtman, Jeff W
Williams, Ziv M
McCarroll, Steven A
Arlotta, Paola
author_sort Quadrato, Giorgia
collection MIT
description © 2017 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. In vitro models of the developing brain such as three-dimensional brain organoids offer an unprecedented opportunity to study aspects of human brain development and disease. However, the cells generated within organoids and the extent to which they recapitulate the regional complexity, cellular diversity and circuit functionality of the brain remain undefined. Here we analyse gene expression in over 80,000 individual cells isolated from 31 human brain organoids. We find that organoids can generate a broad diversity of cells, which are related to endogenous classes, including cells from the cerebral cortex and the retina. Organoids could be developed over extended periods (more than 9 months), allowing for the establishment of relatively mature features, including the formation of dendritic spines and spontaneously active neuronal networks. Finally, neuronal activity within organoids could be controlled using light stimulation of photosensitive cells, which may offer a way to probe the functionality of human neuronal circuits using physiological sensory stimuli.
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spelling mit-1721.1/1357072023-09-06T20:20:35Z Cell diversity and network dynamics in photosensitive human brain organoids Quadrato, Giorgia Nguyen, Tuan Macosko, Evan Z Sherwood, John L Min Yang, Sung Berger, Daniel R Maria, Natalie Scholvin, Jorg Goldman, Melissa Kinney, Justin P Boyden, Edward S Lichtman, Jeff W Williams, Ziv M McCarroll, Steven A Arlotta, Paola Massachusetts Institute of Technology. Department of Biological Engineering Massachusetts Institute of Technology. Department of Brain and Cognitive Sciences Massachusetts Institute of Technology. Media Laboratory McGovern Institute for Brain Research at MIT © 2017 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. In vitro models of the developing brain such as three-dimensional brain organoids offer an unprecedented opportunity to study aspects of human brain development and disease. However, the cells generated within organoids and the extent to which they recapitulate the regional complexity, cellular diversity and circuit functionality of the brain remain undefined. Here we analyse gene expression in over 80,000 individual cells isolated from 31 human brain organoids. We find that organoids can generate a broad diversity of cells, which are related to endogenous classes, including cells from the cerebral cortex and the retina. Organoids could be developed over extended periods (more than 9 months), allowing for the establishment of relatively mature features, including the formation of dendritic spines and spontaneously active neuronal networks. Finally, neuronal activity within organoids could be controlled using light stimulation of photosensitive cells, which may offer a way to probe the functionality of human neuronal circuits using physiological sensory stimuli. 2021-10-27T20:28:54Z 2021-10-27T20:28:54Z 2017 2019-07-19T12:17:07Z Article http://purl.org/eprint/type/JournalArticle https://hdl.handle.net/1721.1/135707 Quadrato, G., et al. "Cell Diversity and Network Dynamics in Photosensitive Human Brain Organoids." Nature (2017). en 10.1038/NATURE22047 Nature Creative Commons Attribution-Noncommercial-Share Alike http://creativecommons.org/licenses/by-nc-sa/4.0/ application/pdf Springer Science and Business Media LLC PMC
spellingShingle Quadrato, Giorgia
Nguyen, Tuan
Macosko, Evan Z
Sherwood, John L
Min Yang, Sung
Berger, Daniel R
Maria, Natalie
Scholvin, Jorg
Goldman, Melissa
Kinney, Justin P
Boyden, Edward S
Lichtman, Jeff W
Williams, Ziv M
McCarroll, Steven A
Arlotta, Paola
Cell diversity and network dynamics in photosensitive human brain organoids
title Cell diversity and network dynamics in photosensitive human brain organoids
title_full Cell diversity and network dynamics in photosensitive human brain organoids
title_fullStr Cell diversity and network dynamics in photosensitive human brain organoids
title_full_unstemmed Cell diversity and network dynamics in photosensitive human brain organoids
title_short Cell diversity and network dynamics in photosensitive human brain organoids
title_sort cell diversity and network dynamics in photosensitive human brain organoids
url https://hdl.handle.net/1721.1/135707
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