Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2

Antiviral monoclonal antibody (mAb) discovery enables the development of antibody-based antiviral therapeutics. Traditional antiviral mAb discovery relies on affinity between antibody and a viral antigen to discover potent neutralizing antibodies, but these approaches are inefficient because many hi...

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Main Authors: Madan, Bharat, Reddem, Eswar R., Wang, Pengfei, Casner, Ryan G., Nair, Manoj S., Huang, Yaoxing, Fahad, Ahmed S., Souza, Matheus Oliveira, Banach, Bailey B., López Acevedo, Sheila N., Pan, Xiaoli, Nimrania, Rajani, Teng, I‐Ting, Bahna, Fabiana, Zhou, Tongqing, Zhang, Baoshan, Yin, Michael T., Ho, David D., Kwong, Peter D., Shapiro, Lawrence, DeKosky, Brandon J.
Other Authors: Massachusetts Institute of Technology. Department of Chemical Engineering
Format: Article
Language:English
Published: Wiley 2022
Online Access:https://hdl.handle.net/1721.1/140317
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author Madan, Bharat
Reddem, Eswar R.
Wang, Pengfei
Casner, Ryan G.
Nair, Manoj S.
Huang, Yaoxing
Fahad, Ahmed S.
Souza, Matheus Oliveira
Banach, Bailey B.
López Acevedo, Sheila N.
Pan, Xiaoli
Nimrania, Rajani
Teng, I‐Ting
Bahna, Fabiana
Zhou, Tongqing
Zhang, Baoshan
Yin, Michael T.
Ho, David D.
Kwong, Peter D.
Shapiro, Lawrence
DeKosky, Brandon J.
author2 Massachusetts Institute of Technology. Department of Chemical Engineering
author_facet Massachusetts Institute of Technology. Department of Chemical Engineering
Madan, Bharat
Reddem, Eswar R.
Wang, Pengfei
Casner, Ryan G.
Nair, Manoj S.
Huang, Yaoxing
Fahad, Ahmed S.
Souza, Matheus Oliveira
Banach, Bailey B.
López Acevedo, Sheila N.
Pan, Xiaoli
Nimrania, Rajani
Teng, I‐Ting
Bahna, Fabiana
Zhou, Tongqing
Zhang, Baoshan
Yin, Michael T.
Ho, David D.
Kwong, Peter D.
Shapiro, Lawrence
DeKosky, Brandon J.
author_sort Madan, Bharat
collection MIT
description Antiviral monoclonal antibody (mAb) discovery enables the development of antibody-based antiviral therapeutics. Traditional antiviral mAb discovery relies on affinity between antibody and a viral antigen to discover potent neutralizing antibodies, but these approaches are inefficient because many high affinity mAbs have no neutralizing activity. We sought to determine whether screening for anti-SARS-CoV-2 mAbs at reduced pH could provide more efficient neutralizing antibody discovery. We mined the antibody response of a convalescent COVID-19 patient at both physiological pH (7.4) and reduced pH (4.5), revealing that SARS-CoV-2 neutralizing antibodies were preferentially enriched in pH 4.5 yeast display sorts. Structural analysis revealed that a potent new antibody called LP5 targets the SARS-CoV-2 N-terminal domain supersite via a unique binding recognition mode. Our data combine with evidence from prior studies to support antibody screening at pH 4.5 to accelerate antiviral neutralizing antibody discovery.
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spelling mit-1721.1/1403172023-04-07T20:37:21Z Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2 Madan, Bharat Reddem, Eswar R. Wang, Pengfei Casner, Ryan G. Nair, Manoj S. Huang, Yaoxing Fahad, Ahmed S. Souza, Matheus Oliveira Banach, Bailey B. López Acevedo, Sheila N. Pan, Xiaoli Nimrania, Rajani Teng, I‐Ting Bahna, Fabiana Zhou, Tongqing Zhang, Baoshan Yin, Michael T. Ho, David D. Kwong, Peter D. Shapiro, Lawrence DeKosky, Brandon J. Massachusetts Institute of Technology. Department of Chemical Engineering Antiviral monoclonal antibody (mAb) discovery enables the development of antibody-based antiviral therapeutics. Traditional antiviral mAb discovery relies on affinity between antibody and a viral antigen to discover potent neutralizing antibodies, but these approaches are inefficient because many high affinity mAbs have no neutralizing activity. We sought to determine whether screening for anti-SARS-CoV-2 mAbs at reduced pH could provide more efficient neutralizing antibody discovery. We mined the antibody response of a convalescent COVID-19 patient at both physiological pH (7.4) and reduced pH (4.5), revealing that SARS-CoV-2 neutralizing antibodies were preferentially enriched in pH 4.5 yeast display sorts. Structural analysis revealed that a potent new antibody called LP5 targets the SARS-CoV-2 N-terminal domain supersite via a unique binding recognition mode. Our data combine with evidence from prior studies to support antibody screening at pH 4.5 to accelerate antiviral neutralizing antibody discovery. 2022-02-14T16:53:01Z 2022-02-14T16:53:01Z 2021-10-04 Article http://purl.org/eprint/type/JournalArticle 0001-1541 1547-5905 https://hdl.handle.net/1721.1/140317 Madan, Bharat, Reddem, Eswar R., Wang, Pengfei, Casner, Ryan G., Nair, Manoj S. et al. 2021. "Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2." AIChE Journal, 67 (12). en http://dx.doi.org/10.1002/aic.17440 AIChE Journal Creative Commons Attribution-Noncommercial-Share Alike http://creativecommons.org/licenses/by-nc-sa/4.0/ application/pdf Wiley Wiley
spellingShingle Madan, Bharat
Reddem, Eswar R.
Wang, Pengfei
Casner, Ryan G.
Nair, Manoj S.
Huang, Yaoxing
Fahad, Ahmed S.
Souza, Matheus Oliveira
Banach, Bailey B.
López Acevedo, Sheila N.
Pan, Xiaoli
Nimrania, Rajani
Teng, I‐Ting
Bahna, Fabiana
Zhou, Tongqing
Zhang, Baoshan
Yin, Michael T.
Ho, David D.
Kwong, Peter D.
Shapiro, Lawrence
DeKosky, Brandon J.
Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2
title Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2
title_full Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2
title_fullStr Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2
title_full_unstemmed Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2
title_short Antibody screening at reduced pH enables preferential selection of potently neutralizing antibodies targeting SARS‐CoV ‐2
title_sort antibody screening at reduced ph enables preferential selection of potently neutralizing antibodies targeting sars cov 2
url https://hdl.handle.net/1721.1/140317
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