Metabolic regulation of species-specific developmental rates

Animals display substantial inter-species variation in the rate of embryonic development despite a broad conservation of the overall sequence of developmental events. Differences in biochemical reaction rates, including the rates of protein production and degradation, are thought to be responsible f...

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Main Authors: Diaz-Cuadros, Margarete, Miettinen, Teemu P, Skinner, Owen S, Sheedy, Dylan, Díaz-García, Carlos Manlio, Gapon, Svetlana, Hubaud, Alexis, Yellen, Gary, Manalis, Scott R, Oldham, William M, Pourquié, Olivier
Other Authors: Massachusetts Institute of Technology. Department of Biological Engineering
Format: Article
Language:English
Published: Springer Science and Business Media LLC 2023
Online Access:https://hdl.handle.net/1721.1/147878
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author Diaz-Cuadros, Margarete
Miettinen, Teemu P
Skinner, Owen S
Sheedy, Dylan
Díaz-García, Carlos Manlio
Gapon, Svetlana
Hubaud, Alexis
Yellen, Gary
Manalis, Scott R
Oldham, William M
Pourquié, Olivier
author2 Massachusetts Institute of Technology. Department of Biological Engineering
author_facet Massachusetts Institute of Technology. Department of Biological Engineering
Diaz-Cuadros, Margarete
Miettinen, Teemu P
Skinner, Owen S
Sheedy, Dylan
Díaz-García, Carlos Manlio
Gapon, Svetlana
Hubaud, Alexis
Yellen, Gary
Manalis, Scott R
Oldham, William M
Pourquié, Olivier
author_sort Diaz-Cuadros, Margarete
collection MIT
description Animals display substantial inter-species variation in the rate of embryonic development despite a broad conservation of the overall sequence of developmental events. Differences in biochemical reaction rates, including the rates of protein production and degradation, are thought to be responsible for species-specific rates of development1-3. However, the cause of differential biochemical reaction rates between species remains unknown. Here, using pluripotent stem cells, we have established an in vitro system that recapitulates the twofold difference in developmental rate between mouse and human embryos. This system provides a quantitative measure of developmental speed as revealed by the period of the segmentation clock, a molecular oscillator associated with the rhythmic production of vertebral precursors. Using this system, we show that mass-specific metabolic rates scale with the developmental rate and are therefore higher in mouse cells than in human cells. Reducing these metabolic rates by inhibiting the electron transport chain slowed down the segmentation clock by impairing the cellular NAD+/NADH redox balance and, further downstream, lowering the global rate of protein synthesis. Conversely, increasing the NAD+/NADH ratio in human cells by overexpression of the Lactobacillus brevis NADH oxidase LbNOX increased the translation rate and accelerated the segmentation clock. These findings represent a starting point for the manipulation of developmental rate, with multiple translational applications including accelerating the differentiation of human pluripotent stem cells for disease modelling and cell-based therapies.
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spelling mit-1721.1/1478782023-02-04T03:21:54Z Metabolic regulation of species-specific developmental rates Diaz-Cuadros, Margarete Miettinen, Teemu P Skinner, Owen S Sheedy, Dylan Díaz-García, Carlos Manlio Gapon, Svetlana Hubaud, Alexis Yellen, Gary Manalis, Scott R Oldham, William M Pourquié, Olivier Massachusetts Institute of Technology. Department of Biological Engineering Animals display substantial inter-species variation in the rate of embryonic development despite a broad conservation of the overall sequence of developmental events. Differences in biochemical reaction rates, including the rates of protein production and degradation, are thought to be responsible for species-specific rates of development1-3. However, the cause of differential biochemical reaction rates between species remains unknown. Here, using pluripotent stem cells, we have established an in vitro system that recapitulates the twofold difference in developmental rate between mouse and human embryos. This system provides a quantitative measure of developmental speed as revealed by the period of the segmentation clock, a molecular oscillator associated with the rhythmic production of vertebral precursors. Using this system, we show that mass-specific metabolic rates scale with the developmental rate and are therefore higher in mouse cells than in human cells. Reducing these metabolic rates by inhibiting the electron transport chain slowed down the segmentation clock by impairing the cellular NAD+/NADH redox balance and, further downstream, lowering the global rate of protein synthesis. Conversely, increasing the NAD+/NADH ratio in human cells by overexpression of the Lactobacillus brevis NADH oxidase LbNOX increased the translation rate and accelerated the segmentation clock. These findings represent a starting point for the manipulation of developmental rate, with multiple translational applications including accelerating the differentiation of human pluripotent stem cells for disease modelling and cell-based therapies. 2023-02-03T19:51:13Z 2023-02-03T19:51:13Z 2023-01-19 2023-02-03T19:45:30Z Article http://purl.org/eprint/type/JournalArticle https://hdl.handle.net/1721.1/147878 Diaz-Cuadros, Margarete, Miettinen, Teemu P, Skinner, Owen S, Sheedy, Dylan, Díaz-García, Carlos Manlio et al. 2023. "Metabolic regulation of species-specific developmental rates." Nature, 613 (7944). en 10.1038/s41586-022-05574-4 Nature Creative Commons Attribution-Noncommercial-Share Alike http://creativecommons.org/licenses/by-nc-sa/4.0/ application/pdf Springer Science and Business Media LLC bioRxiv
spellingShingle Diaz-Cuadros, Margarete
Miettinen, Teemu P
Skinner, Owen S
Sheedy, Dylan
Díaz-García, Carlos Manlio
Gapon, Svetlana
Hubaud, Alexis
Yellen, Gary
Manalis, Scott R
Oldham, William M
Pourquié, Olivier
Metabolic regulation of species-specific developmental rates
title Metabolic regulation of species-specific developmental rates
title_full Metabolic regulation of species-specific developmental rates
title_fullStr Metabolic regulation of species-specific developmental rates
title_full_unstemmed Metabolic regulation of species-specific developmental rates
title_short Metabolic regulation of species-specific developmental rates
title_sort metabolic regulation of species specific developmental rates
url https://hdl.handle.net/1721.1/147878
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