Improving electrochemical hybridization assays with restriction enzymes

Nucleic acids in blood are early indicators of disease that could be detected by point-of-care biosensors if sufficiently sensitive and facile sensors existed. Electrochemical hybridization assays are sensitive and specific but are limited to very short nucleic acids. We have developed a restriction...

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Main Authors: Zhou, Xingcheng, Zamani, Marjon, Austin, Katherine, De Bock, Marieke, Ullola, Joshua Chaj, Rikia, Smah, Furst, Ariel L.
Other Authors: Massachusetts Institute of Technology. Department of Chemical Engineering
Format: Article
Published: Royal Society of Chemistry 2024
Online Access:https://hdl.handle.net/1721.1/156724
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author Zhou, Xingcheng
Zamani, Marjon
Austin, Katherine
De Bock, Marieke
Ullola, Joshua Chaj
Rikia, Smah
Furst, Ariel L.
author2 Massachusetts Institute of Technology. Department of Chemical Engineering
author_facet Massachusetts Institute of Technology. Department of Chemical Engineering
Zhou, Xingcheng
Zamani, Marjon
Austin, Katherine
De Bock, Marieke
Ullola, Joshua Chaj
Rikia, Smah
Furst, Ariel L.
author_sort Zhou, Xingcheng
collection MIT
description Nucleic acids in blood are early indicators of disease that could be detected by point-of-care biosensors if sufficiently sensitive and facile sensors existed. Electrochemical hybridization assays are sensitive and specific but are limited to very short nucleic acids. We have developed a restriction enzyme-assisted electrochemical hybridization (REH) assay for improved nucleic acid detection. By incorporating target-specific restriction enzymes, we detect long nucleic acids, with performance dependent on the location of the cut site relative to the electrode surface. Thus, we have further established guidelines for REH design to serve as a generalizable platform for robust electrochemical detection of long nucleic acids.
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spelling mit-1721.1/1567242024-09-16T20:55:44Z Improving electrochemical hybridization assays with restriction enzymes Zhou, Xingcheng Zamani, Marjon Austin, Katherine De Bock, Marieke Ullola, Joshua Chaj Rikia, Smah Furst, Ariel L. Massachusetts Institute of Technology. Department of Chemical Engineering Massachusetts Institute of Technology. Center for Environmental Health Sciences Nucleic acids in blood are early indicators of disease that could be detected by point-of-care biosensors if sufficiently sensitive and facile sensors existed. Electrochemical hybridization assays are sensitive and specific but are limited to very short nucleic acids. We have developed a restriction enzyme-assisted electrochemical hybridization (REH) assay for improved nucleic acid detection. By incorporating target-specific restriction enzymes, we detect long nucleic acids, with performance dependent on the location of the cut site relative to the electrode surface. Thus, we have further established guidelines for REH design to serve as a generalizable platform for robust electrochemical detection of long nucleic acids. 2024-09-13T15:23:26Z 2024-09-13T15:23:26Z 2024-01-29 Article http://purl.org/eprint/type/JournalArticle 1364-548X https://hdl.handle.net/1721.1/156724 Chem. Commun., 2024,60, 1948-1951 https://doi.org/10.1039/D3CC06192B ChemComm Creative Commons Attribution-Noncommercial https://creativecommons.org/licenses/by-nc/3.0/ application/pdf Royal Society of Chemistry Royal Society of Chemistry
spellingShingle Zhou, Xingcheng
Zamani, Marjon
Austin, Katherine
De Bock, Marieke
Ullola, Joshua Chaj
Rikia, Smah
Furst, Ariel L.
Improving electrochemical hybridization assays with restriction enzymes
title Improving electrochemical hybridization assays with restriction enzymes
title_full Improving electrochemical hybridization assays with restriction enzymes
title_fullStr Improving electrochemical hybridization assays with restriction enzymes
title_full_unstemmed Improving electrochemical hybridization assays with restriction enzymes
title_short Improving electrochemical hybridization assays with restriction enzymes
title_sort improving electrochemical hybridization assays with restriction enzymes
url https://hdl.handle.net/1721.1/156724
work_keys_str_mv AT zhouxingcheng improvingelectrochemicalhybridizationassayswithrestrictionenzymes
AT zamanimarjon improvingelectrochemicalhybridizationassayswithrestrictionenzymes
AT austinkatherine improvingelectrochemicalhybridizationassayswithrestrictionenzymes
AT debockmarieke improvingelectrochemicalhybridizationassayswithrestrictionenzymes
AT ullolajoshuachaj improvingelectrochemicalhybridizationassayswithrestrictionenzymes
AT rikiasmah improvingelectrochemicalhybridizationassayswithrestrictionenzymes
AT furstariell improvingelectrochemicalhybridizationassayswithrestrictionenzymes