Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age

ANTS template created for use in the published article

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Main Authors: Ghosh, SS, Kakunoori, S, Augustinack, Jean, Nieto-Castanon, Alfonso, Kovelman, Ioulia, Gaab, Nadine, Christodoulou, Joanna A., Triantafyllou, Christina, Gabrieli, John, Fischl, Bruce
Format: Dataset
Published: Neuroimage, Elsevier 2013
Subjects:
Online Access:http://hdl.handle.net/1721.1/75815
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author Ghosh, SS
Kakunoori, S
Augustinack, Jean
Nieto-Castanon, Alfonso
Kovelman, Ioulia
Gaab, Nadine
Christodoulou, Joanna A.
Triantafyllou, Christina
Gabrieli, John
Fischl, Bruce
author_facet Ghosh, SS
Kakunoori, S
Augustinack, Jean
Nieto-Castanon, Alfonso
Kovelman, Ioulia
Gaab, Nadine
Christodoulou, Joanna A.
Triantafyllou, Christina
Gabrieli, John
Fischl, Bruce
author_sort Ghosh, SS
collection MIT
description ANTS template created for use in the published article
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institution Massachusetts Institute of Technology
last_indexed 2024-09-23T15:47:10Z
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spelling mit-1721.1/758152019-04-11T02:56:43Z Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age Ghosh, SS Kakunoori, S Augustinack, Jean Nieto-Castanon, Alfonso Kovelman, Ioulia Gaab, Nadine Christodoulou, Joanna A. Triantafyllou, Christina Gabrieli, John Fischl, Bruce ANTS Template Normalization ANTS template created for use in the published article Understanding the neurophysiology of human cognitive development relies on methods that enable accurate comparison of structural and functional neuroimaging data across brains from people of different ages. A fundamental question is whether the substantial brain growth and related changes in brain morphology that occur in early childhood permit valid comparisons of brain structure and function across ages. Here we investigated whether valid comparisons can be made in children from ages 4 to 11, and whether there are differences in the use of volume-based versus surface-based registration approaches for aligning structural landmarks across these ages. Regions corresponding to the calcarine sulcus, central sulcus, and Sylvian fissure in both the hemispheres were manually labeled on T1-weighted structural magnetic resonance images from 31 children ranging in age from 4.2 to 11.2 years old. Quantitative measures of shape similarity and volumetric-overlap of these manually labeled regions were calculated when brains were aligned using a 12-parameter affine transform, SPM's nonlinear normalization, a diffeomorphic registration (ANTS), and FreeSurfer's surface-based registration. Registration error for normalization into a common reference framework across participants in this age range was lower than commonly used functional imaging resolutions. Surface-based registration provided significantly better alignment of cortical landmarks than volume-based registration. In addition, registering children's brains to a common space does not result in an age-associated bias between older and younger children, making it feasible to accurately compare structural properties and patterns of brain activation in children from ages 4 to 11. 2013-01-02T00:49:07Z 2013-01-02T00:49:07Z 2010-10-15 Dataset http://hdl.handle.net/1721.1/75815 Ghosh, Satrajit S., et al. "Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11years of age." NeuroImage 53.1 (2010): 85-93. Attribution 3.0 United States http://creativecommons.org/licenses/by/3.0/us/ application/octet-stream application/pdf application/octet-stream Neuroimage, Elsevier
spellingShingle ANTS
Template
Normalization
Ghosh, SS
Kakunoori, S
Augustinack, Jean
Nieto-Castanon, Alfonso
Kovelman, Ioulia
Gaab, Nadine
Christodoulou, Joanna A.
Triantafyllou, Christina
Gabrieli, John
Fischl, Bruce
Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
title Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
title_full Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
title_fullStr Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
title_full_unstemmed Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
title_short Supplementary Material: Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
title_sort supplementary material evaluating the validity of volume based and surface based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age
topic ANTS
Template
Normalization
url http://hdl.handle.net/1721.1/75815
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