Universal Count Correction for High-Throughput Sequencing
We show that existing RNA-seq, DNase-seq, and ChIP-seq data exhibit overdispersed per-base read count distributions that are not matched to existing computational method assumptions. To compensate for this overdispersion we introduce a nonparametric and universal method for processing per-base seque...
Main Authors: | Hashimoto, Tatsunori Benjamin, Edwards, Matthew Douglas, Gifford, David K. |
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Other Authors: | Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory |
Format: | Article |
Language: | en_US |
Published: |
Public Library of Science
2014
|
Online Access: | http://hdl.handle.net/1721.1/86363 https://orcid.org/0000-0003-0521-5855 https://orcid.org/0000-0002-5845-748X https://orcid.org/0000-0003-1709-4034 |
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