Examination of the nematostella vectensis holobiont by comparative bacterial genomics and metatranscriptomics

Examination of the nematostella vectensis holobiont by comparative bacterial genomics and metatranscriptomics

Thesis: S.M., Massachusetts Institute of Technology, Department of Biology, 2013.

Bibliographic Details
Main Author:	Helbig, Timothy J. (Timothy James)
Other Authors:	Janelle R. Thompson.
Format:	Thesis
Language:	eng
Published:	Massachusetts Institute of Technology 2014
Subjects:	Biology.
Online Access:	http://hdl.handle.net/1721.1/89988

Similar Items

Microbial diversity and activity in the Nematostella vectensis holobiont: insights from 16S rRNA gene sequencing, isolate genomes, and a pilot-scale survey of gene expression
by: Har, Jia Y., et al.
Published: (2015)

Different substrate specificities of the two ADPR binding sites in TRPM2 channels of Nematostella vectensis and the role of IDPR
by: Kühn, F, et al.
Published: (2019)

Introducing the starlet sea anemone Nematostella vectensis as a model for investigating microbial mediation of health and disease in hexacorals
by: Har, Jia Yi
Published: (2010)

The genetic structure of the rare lagoonal sea anemone, Nematostella vectensis Stephenson (Cnidaria; Anthozoa) in the United Kingdom based on RAPD analysis.
by: Pearson, C, et al.
Published: (2002)

Understanding the holobiont: the interdependence of plants and their microbiome
by: Sánchez-Cañizares, C, et al.
Published: (2017)

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants.
by: Turner, T, et al.
Published: (2013)

Holobiont Urbanism: sampling urban beehives reveals cities’ metagenomes
by: Hénaff, Elizabeth, et al.
Published: (2023)

Interactions within the microbiome alter microbial interactions with host chemical defences and affect disease in a marine holobiont
by: Longford, Sharon Rae, et al.
Published: (2019)

Insights into bacterial community metatranscriptome and metabolome in river water influenced by palm oil mill effluent final discharge
by: Sharuddin, Siti S, et al.
Published: (2023)

Microbes in the coral holobiont: partners through evolution, development, and ecological interactions
by: Rivera, Hanny E., et al.
Published: (2015)

Metatranscriptomic and physiological analyses of proteorhodopsin-containing marine flavobacteria
by: Kim, Hana, S.M. Massachusetts Institute of Technology
Published: (2014)

Bacterial genes and genome dynamics in the environment
by: Timberlake, Sonia C
Published: (2013)

Coastal urbanisation affects microbial communities on a dominant marine holobiont
by: Marzinelli, Ezequiel Miguel, et al.
Published: (2018)

Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton
by: Ottesen, Elizabeth, et al.
Published: (2012)

A holobiont view of island biogeography: unravelling patterns driving the nascent diversification of a Hawaiian spider and its microbial associates
by: Armstrong, Ellie E., et al.
Published: (2022)

Microbial metatranscriptomics in a permanent marine oxygen minimum zone
by: Stewart, Frank J., et al.
Published: (2012)

Toward a Holobiont Urbanism : microbial sampling scalability through Apis mellifera
by: Perez, Miguel (Miguel Angel)
Published: (2018)

Metatranscriptomic and functional metagenomic analysis of methylphosphonate utilization by marine bacteria
by: Ventouras, Laure-Anne, et al.
Published: (2014)

Metatranscriptome analyses indicate resource partitioning between diatoms in the field
by: Alexander, Harriet, et al.
Published: (2015)

Primer-free FISH probes from metagenomics/metatranscriptomics data permit the study of uncharacterised taxa in complex microbial communities
by: Tan, Shi Ming, et al.
Published: (2020)

Reverse engineering environmental metatranscriptomes clarifies best practices for eukaryotic assembly
by: Krinos, Arianna I., et al.
Published: (2023)

Reverse engineering environmental metatranscriptomes clarifies best practices for eukaryotic assembly
by: Krinos, Arianna I., et al.
Published: (2023)

Advancement of metatranscriptomics towards productive agriculture and sustainable environment: a review
by: Sharuddin, Siti Suhailah, et al.
Published: (2022)

Metagenomics and metatranscriptomics suggest pathways of 3-chloroaniline degradation in wastewater reactors
by: Seshan, Hari, et al.
Published: (2023)

Do cnidarians have a ParaHox cluster? Analysis of synteny around a Nematostella homeobox gene cluster.
by: Hui, J, et al.
Published: (2008)

Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities
by: Gilbert, J, et al.
Published: (2008)

Microbial metatranscriptomics : towards understanding microbial gene expression and regulation in natural habitats
by: Shi, Yanmei, Ph. D. Massachusetts Institute of Technology
Published: (2011)

Disentangling direct vs indirect effects of microbiome manipulations in a habitat-forming marine holobiont
by: McGrath, Alexander Harry, et al.
Published: (2024)

Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics
by: Stewart, Frank J., et al.
Published: (2012)

Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the North Pacific Subtropical Gyre
by: Shi, Yanmei, et al.
Published: (2012)

Metatranscriptomics reveal differences in in situ energy and nitrogen metabolism among hydrothermal vent snail symbionts
by: Sanders, J. G., et al.
Published: (2014)

Psychologism with respect to logic : an examination of some theses
by: Appelt, Timothy James
Published: (2009)

Metagenomic and metatranscriptomic analysis of saliva reveals disease-associated microbiota in patients with periodontitis and dental caries
by: Drautz-Moses, Daniela Isabel, et al.
Published: (2018)

Marine sponges in a snowstorm - extreme sensitivity of a sponge holobiont to marine oil snow and chemically dispersed oil pollution
by: Vad, Johanne, et al.
Published: (2022)

Form and function of Poly(A) tails
by: Eisen, Timothy J.(Timothy Jonas)
Published: (2020)

A genomic approach to bacterial taxonomy: an examination and proposed reclassification of species within the genus Neisseria.
by: Bennett, J, et al.
Published: (2012)

Draft genome sequence of Nocardia jinanensis, an opportunistic bacterial pathogen that causes cellulitis
by: Chakrabortti, Alolika, et al.
Published: (2019)

Ecology, diversity and comparative genomics of oceanic cyanobacterial viruses
by: Sullivan, Matthew Brian, 1975-
Published: (2007)

Bacteria.guru: comparative transcriptomics and co-expression database for bacterial pathogens
by: Lim, Peng Ken, et al.
Published: (2022)

The influence of mucins on bacterial communities
by: Co, Julia Yin-Ting
Published: (2015)