Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities
Large intergenic noncoding (linc) RNAs represent a newly described class of ribonucleic acid whose importance in human disease remains undefined. We identified a severely developmentally delayed 16-year-old female with karyotype 46,XX,t(2;11)(p25.1;p15.1)dn in the absence of clinically significant c...
| Main Authors: | , |
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| Format: | Article |
| Language: | en_US |
| Published: |
Elsevier
2014
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| Online Access: | http://hdl.handle.net/1721.1/91537 |
| _version_ | 1826199137460158464 |
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| author | Kellis, Manolis Lin, Michael F. |
| author2 | Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory |
| author_facet | Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory Kellis, Manolis Lin, Michael F. |
| author_sort | Kellis, Manolis |
| collection | MIT |
| description | Large intergenic noncoding (linc) RNAs represent a newly described class of ribonucleic acid whose importance in human disease remains undefined. We identified a severely developmentally delayed 16-year-old female with karyotype 46,XX,t(2;11)(p25.1;p15.1)dn in the absence of clinically significant copy number variants (CNVs). DNA capture followed by next-generation sequencing of the translocation breakpoints revealed disruption of a single noncoding gene on chromosome 2, LINC00299, whose RNA product is expressed in all tissues measured, but most abundantly in brain. Among a series of additional, unrelated subjects referred for clinical diagnostic testing who showed CNV affecting this locus, we identified four with exon-crossing deletions in association with neurodevelopmental abnormalities. No disruption of the LINC00299 coding sequence was seen in almost 14,000 control subjects. Together, these subjects with disruption of LINC00299 implicate this particular noncoding RNA in brain development and raise the possibility that, as a class, abnormalities of lincRNAs may play a significant role in human developmental disorders. |
| first_indexed | 2024-09-23T11:15:18Z |
| format | Article |
| id | mit-1721.1/91537 |
| institution | Massachusetts Institute of Technology |
| language | en_US |
| last_indexed | 2024-09-23T11:15:18Z |
| publishDate | 2014 |
| publisher | Elsevier |
| record_format | dspace |
| spelling | mit-1721.1/915372022-10-01T02:22:18Z Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities Kellis, Manolis Lin, Michael F. Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology. Department of Electrical Engineering and Computer Science Kellis, Manolis Lin, Michael F. Large intergenic noncoding (linc) RNAs represent a newly described class of ribonucleic acid whose importance in human disease remains undefined. We identified a severely developmentally delayed 16-year-old female with karyotype 46,XX,t(2;11)(p25.1;p15.1)dn in the absence of clinically significant copy number variants (CNVs). DNA capture followed by next-generation sequencing of the translocation breakpoints revealed disruption of a single noncoding gene on chromosome 2, LINC00299, whose RNA product is expressed in all tissues measured, but most abundantly in brain. Among a series of additional, unrelated subjects referred for clinical diagnostic testing who showed CNV affecting this locus, we identified four with exon-crossing deletions in association with neurodevelopmental abnormalities. No disruption of the LINC00299 coding sequence was seen in almost 14,000 control subjects. Together, these subjects with disruption of LINC00299 implicate this particular noncoding RNA in brain development and raise the possibility that, as a class, abnormalities of lincRNAs may play a significant role in human developmental disorders. 2014-11-13T17:55:53Z 2014-11-13T17:55:53Z 2012-12 2012-10 Article http://purl.org/eprint/type/JournalArticle 00029297 1537-6605 http://hdl.handle.net/1721.1/91537 Talkowski, Michael E., Gilles Maussion, Liam Crapper, Jill A. Rosenfeld, Ian Blumenthal, Carrie Hanscom, Colby Chiang, et al. “Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities.” The American Journal of Human Genetics 91, no. 6 (December 2012): 1128–1134. © 2012 The American Society of Human Genetics en_US http://dx.doi.org/10.1016/j.ajhg.2012.10.016 The American Journal of Human Genetics Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use. application/pdf Elsevier Elsevier |
| spellingShingle | Kellis, Manolis Lin, Michael F. Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities |
| title | Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities |
| title_full | Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities |
| title_fullStr | Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities |
| title_full_unstemmed | Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities |
| title_short | Disruption of a Large Intergenic Noncoding RNA in Subjects with Neurodevelopmental Disabilities |
| title_sort | disruption of a large intergenic noncoding rna in subjects with neurodevelopmental disabilities |
| url | http://hdl.handle.net/1721.1/91537 |
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