Genetic Evidence for Recent Population Mixture in India

Most Indian groups descend from a mixture of two genetically divergent populations: Ancestral North Indians (ANI) related to Central Asians, Middle Easterners, Caucasians, and Europeans; and Ancestral South Indians (ASI) not closely related to groups outside the subcontinent. The date of mixture is...

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Main Authors: Moorjani, Priya, Thangaraj, Kumarasamy, Patterson, Nick, Lipson, Mark, Loh, Po-Ru, Govindaraj, Periyasamy, Berger, Bonnie, Reich, David, Singh, Lalji
Other Authors: Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory
Format: Article
Language:en_US
Published: Elsevier 2014
Online Access:http://hdl.handle.net/1721.1/92415
https://orcid.org/0000-0002-2724-7228
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author Moorjani, Priya
Thangaraj, Kumarasamy
Patterson, Nick
Lipson, Mark
Loh, Po-Ru
Govindaraj, Periyasamy
Berger, Bonnie
Reich, David
Singh, Lalji
author2 Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory
author_facet Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory
Moorjani, Priya
Thangaraj, Kumarasamy
Patterson, Nick
Lipson, Mark
Loh, Po-Ru
Govindaraj, Periyasamy
Berger, Bonnie
Reich, David
Singh, Lalji
author_sort Moorjani, Priya
collection MIT
description Most Indian groups descend from a mixture of two genetically divergent populations: Ancestral North Indians (ANI) related to Central Asians, Middle Easterners, Caucasians, and Europeans; and Ancestral South Indians (ASI) not closely related to groups outside the subcontinent. The date of mixture is unknown but has implications for understanding Indian history. We report genome-wide data from 73 groups from the Indian subcontinent and analyze linkage disequilibrium to estimate ANI-ASI mixture dates ranging from about 1,900 to 4,200 years ago. In a subset of groups, 100% of the mixture is consistent with having occurred during this period. These results show that India experienced a demographic transformation several thousand years ago, from a region in which major population mixture was common to one in which mixture even between closely related groups became rare because of a shift to endogamy.
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spelling mit-1721.1/924152022-09-26T17:41:54Z Genetic Evidence for Recent Population Mixture in India Moorjani, Priya Thangaraj, Kumarasamy Patterson, Nick Lipson, Mark Loh, Po-Ru Govindaraj, Periyasamy Berger, Bonnie Reich, David Singh, Lalji Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory Massachusetts Institute of Technology. Department of Mathematics Lipson, Mark Loh, Po-Ru Berger, Bonnie Most Indian groups descend from a mixture of two genetically divergent populations: Ancestral North Indians (ANI) related to Central Asians, Middle Easterners, Caucasians, and Europeans; and Ancestral South Indians (ASI) not closely related to groups outside the subcontinent. The date of mixture is unknown but has implications for understanding Indian history. We report genome-wide data from 73 groups from the Indian subcontinent and analyze linkage disequilibrium to estimate ANI-ASI mixture dates ranging from about 1,900 to 4,200 years ago. In a subset of groups, 100% of the mixture is consistent with having occurred during this period. These results show that India experienced a demographic transformation several thousand years ago, from a region in which major population mixture was common to one in which mixture even between closely related groups became rare because of a shift to endogamy. National Science Foundation (U.S.). Graduate Research Fellowship 2014-12-19T19:48:19Z 2014-12-19T19:48:19Z 2013-08 2013-05 Article http://purl.org/eprint/type/JournalArticle 00029297 1537-6605 http://hdl.handle.net/1721.1/92415 Moorjani, Priya, Kumarasamy Thangaraj, Nick Patterson, Mark Lipson, Po-Ru Loh, Periyasamy Govindaraj, Bonnie Berger, David Reich, and Lalji Singh. “Genetic Evidence for Recent Population Mixture in India.” The American Journal of Human Genetics 93, no. 3 (September 2013): 422–438. © 2013 The American Society of Human Genetics https://orcid.org/0000-0002-2724-7228 en_US http://dx.doi.org/10.1016/j.ajhg.2013.07.006 The American Journal of Human Genetics Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use. application/pdf Elsevier Elsevier Open Archive
spellingShingle Moorjani, Priya
Thangaraj, Kumarasamy
Patterson, Nick
Lipson, Mark
Loh, Po-Ru
Govindaraj, Periyasamy
Berger, Bonnie
Reich, David
Singh, Lalji
Genetic Evidence for Recent Population Mixture in India
title Genetic Evidence for Recent Population Mixture in India
title_full Genetic Evidence for Recent Population Mixture in India
title_fullStr Genetic Evidence for Recent Population Mixture in India
title_full_unstemmed Genetic Evidence for Recent Population Mixture in India
title_short Genetic Evidence for Recent Population Mixture in India
title_sort genetic evidence for recent population mixture in india
url http://hdl.handle.net/1721.1/92415
https://orcid.org/0000-0002-2724-7228
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