Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia
Streptomyces learnhanii sp. nov. MUM 203JT was isolated from Malaysia mangrove soil. This Gram-positive bacterium produces pale greenish-yellow aerial and greyish-yellow substrate mycelia on ISP 2 agar. The taxonomy status of strain MUM 203JT was determined via a polyphasic approach comprising pheno...
| Main Authors: | , , , , , , , |
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| Other Authors: | |
| Format: | Journal Article |
| Language: | English |
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2024
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| Online Access: | https://hdl.handle.net/10356/173562 |
| _version_ | 1826120577747779584 |
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| author | Law, Jodi Woan-Fei Letchumanan, Vengadesh Hong, Kar-Wai Wong, Sunny Hei Mutalib, Nurul Syakima Ab He, Ya-Wen Chan, Kok-Gan Tan, Loh Teng-Hern |
| author2 | Lee Kong Chian School of Medicine (LKCMedicine) |
| author_facet | Lee Kong Chian School of Medicine (LKCMedicine) Law, Jodi Woan-Fei Letchumanan, Vengadesh Hong, Kar-Wai Wong, Sunny Hei Mutalib, Nurul Syakima Ab He, Ya-Wen Chan, Kok-Gan Tan, Loh Teng-Hern |
| author_sort | Law, Jodi Woan-Fei |
| collection | NTU |
| description | Streptomyces learnhanii sp. nov. MUM 203JT was isolated from Malaysia mangrove soil. This Gram-positive bacterium produces pale greenish-yellow aerial and greyish-yellow substrate mycelia on ISP 2 agar. The taxonomy status of strain MUM 203JT was determined via a polyphasic approach comprising phenotypic observations, genomic and phylogenetic analyses, and chemotaxonomic analyses. The strain demonstrated typical Streptomyces features based on a series of phenotypic and chemotaxonomic evaluations. In particular, the cell wall peptidoglycan contained LL-diaminopimelic acid, and the predominant menaquinones detected include MK9(H8). Analysis of whole-cell sugars revealed the presence of glucose, ribose and mannose. The polar lipid profile of the strain comprised lipid, glycolipid, phospholipid, phosphatidylglycerol, phosphatidylinositol, phosphatidylethanolamine, phosphoglycolipid, and diphosphatidylglycerol. The major cellular fatty acids (>10.0 %) were anteiso-C15:0 (24.7 %), anteiso-C17:0 (16.4 %), iso-C16:0 (15.7 %), iso-C15:0 (11.5 %), and C16:0 (11.1 %). The closely related type strains for strain MUM 203JT, as determined by phylogenetic analysis, include Streptomyces coeruleorubidus JCM 4359T (98.8 %), Streptomyces coeruleoprunus JCM 6919T (98.5 %), Streptomyces thermocarboxydovorans NBRC 16324T (98.1 %). The DNA–DNA relatedness values between strain MUM 203JT and closely related type strains ranged from 10.7 ± 0.6 % to 23.3 ± 4.7 %. Strain MUM 203JT has a genome size of 6,446,886 bp, with DNA G + C content of 72.26 mol%. Based on the polyphasic study of strain MUM 203JT, it can be concluded that this strain represents a novel species, for which the name Streptomyces learnhanii sp. nov. is proposed. The type strain is MUM 203JT (= NBRC 114250T = MCCC 1K04200T). |
| first_indexed | 2024-10-01T05:19:02Z |
| format | Journal Article |
| id | ntu-10356/173562 |
| institution | Nanyang Technological University |
| language | English |
| last_indexed | 2024-10-01T05:19:02Z |
| publishDate | 2024 |
| record_format | dspace |
| spelling | ntu-10356/1735622024-02-18T15:38:03Z Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia Law, Jodi Woan-Fei Letchumanan, Vengadesh Hong, Kar-Wai Wong, Sunny Hei Mutalib, Nurul Syakima Ab He, Ya-Wen Chan, Kok-Gan Tan, Loh Teng-Hern Lee Kong Chian School of Medicine (LKCMedicine) Medicine, Health and Life Sciences Streptomyces Learnhanii Actinobacterium Streptomyces learnhanii sp. nov. MUM 203JT was isolated from Malaysia mangrove soil. This Gram-positive bacterium produces pale greenish-yellow aerial and greyish-yellow substrate mycelia on ISP 2 agar. The taxonomy status of strain MUM 203JT was determined via a polyphasic approach comprising phenotypic observations, genomic and phylogenetic analyses, and chemotaxonomic analyses. The strain demonstrated typical Streptomyces features based on a series of phenotypic and chemotaxonomic evaluations. In particular, the cell wall peptidoglycan contained LL-diaminopimelic acid, and the predominant menaquinones detected include MK9(H8). Analysis of whole-cell sugars revealed the presence of glucose, ribose and mannose. The polar lipid profile of the strain comprised lipid, glycolipid, phospholipid, phosphatidylglycerol, phosphatidylinositol, phosphatidylethanolamine, phosphoglycolipid, and diphosphatidylglycerol. The major cellular fatty acids (>10.0 %) were anteiso-C15:0 (24.7 %), anteiso-C17:0 (16.4 %), iso-C16:0 (15.7 %), iso-C15:0 (11.5 %), and C16:0 (11.1 %). The closely related type strains for strain MUM 203JT, as determined by phylogenetic analysis, include Streptomyces coeruleorubidus JCM 4359T (98.8 %), Streptomyces coeruleoprunus JCM 6919T (98.5 %), Streptomyces thermocarboxydovorans NBRC 16324T (98.1 %). The DNA–DNA relatedness values between strain MUM 203JT and closely related type strains ranged from 10.7 ± 0.6 % to 23.3 ± 4.7 %. Strain MUM 203JT has a genome size of 6,446,886 bp, with DNA G + C content of 72.26 mol%. Based on the polyphasic study of strain MUM 203JT, it can be concluded that this strain represents a novel species, for which the name Streptomyces learnhanii sp. nov. is proposed. The type strain is MUM 203JT (= NBRC 114250T = MCCC 1K04200T). Published version 2024-02-14T04:29:21Z 2024-02-14T04:29:21Z 2023 Journal Article Law, J. W., Letchumanan, V., Hong, K., Wong, S. H., Mutalib, N. S. A., He, Y., Chan, K. & Tan, L. T. (2023). Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia. Progress in Microbes and Molecular Biology, 6(1). https://dx.doi.org/10.36877/pmmb.a0000342 2637-1049 https://hdl.handle.net/10356/173562 10.36877/pmmb.a0000342 2-s2.0-85170061513 1 6 en Progress in Microbes and Molecular Biology © 2023 Jodi Woan-Fei Law, Vengadesh Letchumanan, Kar-Wai Hong, Sunny Hei Wong, Nurul Syakima Ab Mutalib, Ya-Wen He, Kok-Gan Chan, Loh Teng-Hern Tan. This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License. application/pdf |
| spellingShingle | Medicine, Health and Life Sciences Streptomyces Learnhanii Actinobacterium Law, Jodi Woan-Fei Letchumanan, Vengadesh Hong, Kar-Wai Wong, Sunny Hei Mutalib, Nurul Syakima Ab He, Ya-Wen Chan, Kok-Gan Tan, Loh Teng-Hern Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia |
| title | Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia |
| title_full | Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia |
| title_fullStr | Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia |
| title_full_unstemmed | Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia |
| title_short | Streptomyces learnhanii sp. nov., unveiling a mangrove-derived novel “modern actinobacteria” in Malaysia |
| title_sort | streptomyces learnhanii sp nov unveiling a mangrove derived novel modern actinobacteria in malaysia |
| topic | Medicine, Health and Life Sciences Streptomyces Learnhanii Actinobacterium |
| url | https://hdl.handle.net/10356/173562 |
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