Multi-compartment model analysis in diffusion tensor imaging

Diffusion Weighted Imaging (DWI) and Diffusion Tensor Imaging (DTI) are newly emerging techniques in Magnetic Resonance Imaging (MRI). These techniques enable studying connectivity and fibre orientations in different regions of the brain and also detecting abnormalities due to pathological condition...

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Bibliographic Details
Main Author: Rashi Samur
Other Authors: Vitali Zagorodnov
Format: Thesis
Language:English
Published: 2012
Subjects:
Online Access:https://hdl.handle.net/10356/50594
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author Rashi Samur
author2 Vitali Zagorodnov
author_facet Vitali Zagorodnov
Rashi Samur
author_sort Rashi Samur
collection NTU
description Diffusion Weighted Imaging (DWI) and Diffusion Tensor Imaging (DTI) are newly emerging techniques in Magnetic Resonance Imaging (MRI). These techniques enable studying connectivity and fibre orientations in different regions of the brain and also detecting abnormalities due to pathological conditions and physiological defects in the brain, which were not possible with conventional MRI techniques. One challenging area of research in DWI is the estimation of multiple diffusion compartments within individual voxels of a DWI image. The concept behind this estimation is that different regions of the brain have different diffusivities, and a single voxel in the image can contain more than one such diffusion component. This report presents our thorough study of multi-compartment estimation problem in DWI, focusing primarily on two compartment estimation problem due to two major types of diffusion compartments – water diffusion and vascular blood flow. There are two methods of estimation proposed in this study, both achieving accurate results when compared with the ground truth values. The algorithms are tested both on synthetic data as well as on actual brain data.
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spelling ntu-10356/505942023-03-04T00:37:00Z Multi-compartment model analysis in diffusion tensor imaging Rashi Samur Vitali Zagorodnov School of Computer Engineering DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences DRNTU::Engineering::Computer science and engineering::Computing methodologies::Image processing and computer vision DRNTU::Engineering::Computer science and engineering::Mathematics of computing::Probability and statistics Diffusion Weighted Imaging (DWI) and Diffusion Tensor Imaging (DTI) are newly emerging techniques in Magnetic Resonance Imaging (MRI). These techniques enable studying connectivity and fibre orientations in different regions of the brain and also detecting abnormalities due to pathological conditions and physiological defects in the brain, which were not possible with conventional MRI techniques. One challenging area of research in DWI is the estimation of multiple diffusion compartments within individual voxels of a DWI image. The concept behind this estimation is that different regions of the brain have different diffusivities, and a single voxel in the image can contain more than one such diffusion component. This report presents our thorough study of multi-compartment estimation problem in DWI, focusing primarily on two compartment estimation problem due to two major types of diffusion compartments – water diffusion and vascular blood flow. There are two methods of estimation proposed in this study, both achieving accurate results when compared with the ground truth values. The algorithms are tested both on synthetic data as well as on actual brain data. MASTER OF ENGINEERING (SCE) 2012-07-17T01:58:17Z 2012-07-17T01:58:17Z 2012 2012 Thesis Rashi, S. (2012). Multi-compartment model analysis in diffusion tensor imaging. Master’s thesis, Nanyang Technological University, Singapore. https://hdl.handle.net/10356/50594 10.32657/10356/50594 en 59 p. application/pdf
spellingShingle DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences
DRNTU::Engineering::Computer science and engineering::Computing methodologies::Image processing and computer vision
DRNTU::Engineering::Computer science and engineering::Mathematics of computing::Probability and statistics
Rashi Samur
Multi-compartment model analysis in diffusion tensor imaging
title Multi-compartment model analysis in diffusion tensor imaging
title_full Multi-compartment model analysis in diffusion tensor imaging
title_fullStr Multi-compartment model analysis in diffusion tensor imaging
title_full_unstemmed Multi-compartment model analysis in diffusion tensor imaging
title_short Multi-compartment model analysis in diffusion tensor imaging
title_sort multi compartment model analysis in diffusion tensor imaging
topic DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences
DRNTU::Engineering::Computer science and engineering::Computing methodologies::Image processing and computer vision
DRNTU::Engineering::Computer science and engineering::Mathematics of computing::Probability and statistics
url https://hdl.handle.net/10356/50594
work_keys_str_mv AT rashisamur multicompartmentmodelanalysisindiffusiontensorimaging