Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation

The ‘acidic patch’ is a highly electronegative cleft on the histone H2A–H2B dimer in the nucleosome. It is a fundamental motif for protein binding and chromatin dynamics, but the cellular impact of targeting this potentially therapeutic site with exogenous molecules remains unclear. Here, we charact...

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Main Authors: Davey, Gabriela Elzbieta, Adhireksan, Zenita, Ma, Zhujun, Riedel, Tina, Sharma, Deepti, Padavattan, Sivaraman, Rhodes, Daniela, Ludwig, Alexander, Sandin, Sara, Murray, Benjamin S., Dyson, Paul J., Davey, Curtis Alexander
Other Authors: Lee Kong Chian School of Medicine (LKCMedicine)
Format: Journal Article
Language:English
Published: 2018
Subjects:
Online Access:https://hdl.handle.net/10356/89472
http://hdl.handle.net/10220/44965
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author Davey, Gabriela Elzbieta
Adhireksan, Zenita
Ma, Zhujun
Riedel, Tina
Sharma, Deepti
Padavattan, Sivaraman
Rhodes, Daniela
Ludwig, Alexander
Sandin, Sara
Murray, Benjamin S.
Dyson, Paul J.
Davey, Curtis Alexander
author2 Lee Kong Chian School of Medicine (LKCMedicine)
author_facet Lee Kong Chian School of Medicine (LKCMedicine)
Davey, Gabriela Elzbieta
Adhireksan, Zenita
Ma, Zhujun
Riedel, Tina
Sharma, Deepti
Padavattan, Sivaraman
Rhodes, Daniela
Ludwig, Alexander
Sandin, Sara
Murray, Benjamin S.
Dyson, Paul J.
Davey, Curtis Alexander
author_sort Davey, Gabriela Elzbieta
collection NTU
description The ‘acidic patch’ is a highly electronegative cleft on the histone H2A–H2B dimer in the nucleosome. It is a fundamental motif for protein binding and chromatin dynamics, but the cellular impact of targeting this potentially therapeutic site with exogenous molecules remains unclear. Here, we characterize a family of binuclear ruthenium compounds that selectively target the nucleosome acidic patch, generating intra-nucleosomal H2A-H2B cross-links as well as inter-nucleosomal cross-links. In contrast to cisplatin or the progenitor RAPTA-C anticancer drugs, the binuclear agents neither arrest specific cell cycle phases nor elicit DNA damage response, but rather induce an irreversible, anomalous state of condensed chromatin that ultimately results in apoptosis. In vitro, the compounds induce misfolding of chromatin fibre and block the binding of the regulator of chromatin condensation 1 (RCC1) acidic patch-binding protein. This family of chromatin-modifying molecules has potential for applications in drug development and as tools for chromatin research.
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spelling ntu-10356/894722023-02-28T17:03:49Z Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation Davey, Gabriela Elzbieta Adhireksan, Zenita Ma, Zhujun Riedel, Tina Sharma, Deepti Padavattan, Sivaraman Rhodes, Daniela Ludwig, Alexander Sandin, Sara Murray, Benjamin S. Dyson, Paul J. Davey, Curtis Alexander Lee Kong Chian School of Medicine (LKCMedicine) School of Biological Sciences NTU Institute of Structural Biology Ruthenium Chromatin Condensation The ‘acidic patch’ is a highly electronegative cleft on the histone H2A–H2B dimer in the nucleosome. It is a fundamental motif for protein binding and chromatin dynamics, but the cellular impact of targeting this potentially therapeutic site with exogenous molecules remains unclear. Here, we characterize a family of binuclear ruthenium compounds that selectively target the nucleosome acidic patch, generating intra-nucleosomal H2A-H2B cross-links as well as inter-nucleosomal cross-links. In contrast to cisplatin or the progenitor RAPTA-C anticancer drugs, the binuclear agents neither arrest specific cell cycle phases nor elicit DNA damage response, but rather induce an irreversible, anomalous state of condensed chromatin that ultimately results in apoptosis. In vitro, the compounds induce misfolding of chromatin fibre and block the binding of the regulator of chromatin condensation 1 (RCC1) acidic patch-binding protein. This family of chromatin-modifying molecules has potential for applications in drug development and as tools for chromatin research. MOE (Min. of Education, S’pore) NMRC (Natl Medical Research Council, S’pore) Published version 2018-06-06T03:37:31Z 2019-12-06T17:26:16Z 2018-06-06T03:37:31Z 2019-12-06T17:26:16Z 2017 Journal Article Davey, G. E., Adhireksan, Z., Ma, Z., Riedel, T., Sharma, D., Padavattan, S., et al. (2017). Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation. Nature Communications, 8(1), 1575-. 2041-1723 https://hdl.handle.net/10356/89472 http://hdl.handle.net/10220/44965 10.1038/s41467-017-01680-4 en Nature Communications © 2017 The Author(s). This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. 13 p. application/pdf
spellingShingle Ruthenium
Chromatin Condensation
Davey, Gabriela Elzbieta
Adhireksan, Zenita
Ma, Zhujun
Riedel, Tina
Sharma, Deepti
Padavattan, Sivaraman
Rhodes, Daniela
Ludwig, Alexander
Sandin, Sara
Murray, Benjamin S.
Dyson, Paul J.
Davey, Curtis Alexander
Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
title Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
title_full Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
title_fullStr Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
title_full_unstemmed Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
title_short Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation
title_sort nucleosome acidic patch targeting binuclear ruthenium compounds induce aberrant chromatin condensation
topic Ruthenium
Chromatin Condensation
url https://hdl.handle.net/10356/89472
http://hdl.handle.net/10220/44965
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