Pairwise alignment of DNA sequence using hypercomplex number representation
A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and inc...
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| Format: | Conference Paper |
| Language: | English |
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2011
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| Online Access: | https://hdl.handle.net/10356/94066 http://hdl.handle.net/10220/7307 http://www.epsmso.gr/all_conf_index/abstracts/scce04_104.pdf |
| _version_ | 1826130131446398976 |
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| author | Shu, Jian Jun Ouw, Li Shan |
| author2 | School of Mechanical and Aerospace Engineering |
| author_facet | School of Mechanical and Aerospace Engineering Shu, Jian Jun Ouw, Li Shan |
| author_sort | Shu, Jian Jun |
| collection | NTU |
| description | A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and various algorithms of sequence alignment. The problem of DNA sequence alignment can be processed in a rather similar way as pairwise alignment of protein sequence. |
| first_indexed | 2024-10-01T07:51:29Z |
| format | Conference Paper |
| id | ntu-10356/94066 |
| institution | Nanyang Technological University |
| language | English |
| last_indexed | 2024-10-01T07:51:29Z |
| publishDate | 2011 |
| record_format | dspace |
| spelling | ntu-10356/940662019-12-06T18:50:15Z Pairwise alignment of DNA sequence using hypercomplex number representation Shu, Jian Jun Ouw, Li Shan School of Mechanical and Aerospace Engineering International Conference “From Scientific Computing to Computational Engineering” (1st : 2004 : Greece) DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and various algorithms of sequence alignment. The problem of DNA sequence alignment can be processed in a rather similar way as pairwise alignment of protein sequence. 2011-10-19T04:30:24Z 2019-12-06T18:50:15Z 2011-10-19T04:30:24Z 2019-12-06T18:50:15Z 2004 2004 Conference Paper Shu, J. J., & Ouw, L. S. (2004). Pairwise alignment of DNA sequence using hypercomplex number representation. International Conference “From Scientific Computing to Computational Engineering”. https://hdl.handle.net/10356/94066 http://hdl.handle.net/10220/7307 http://www.epsmso.gr/all_conf_index/abstracts/scce04_104.pdf 92721 en © 2004 IC-SCCE. 7 p. |
| spellingShingle | DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences Shu, Jian Jun Ouw, Li Shan Pairwise alignment of DNA sequence using hypercomplex number representation |
| title | Pairwise alignment of DNA sequence using hypercomplex number representation |
| title_full | Pairwise alignment of DNA sequence using hypercomplex number representation |
| title_fullStr | Pairwise alignment of DNA sequence using hypercomplex number representation |
| title_full_unstemmed | Pairwise alignment of DNA sequence using hypercomplex number representation |
| title_short | Pairwise alignment of DNA sequence using hypercomplex number representation |
| title_sort | pairwise alignment of dna sequence using hypercomplex number representation |
| topic | DRNTU::Engineering::Computer science and engineering::Computer applications::Life and medical sciences |
| url | https://hdl.handle.net/10356/94066 http://hdl.handle.net/10220/7307 http://www.epsmso.gr/all_conf_index/abstracts/scce04_104.pdf |
| work_keys_str_mv | AT shujianjun pairwisealignmentofdnasequenceusinghypercomplexnumberrepresentation AT ouwlishan pairwisealignmentofdnasequenceusinghypercomplexnumberrepresentation |