KAJIAN KERAGAMAN GENETIK GEN PENYANDI NADH Dehydrogenase Sub-unit 6 (ND6) PADA Tarsius bancanus ASAL KALIMANTAN DAN SUMATERA

Tarsius sp. is one of Indonesian endemic primate species which are �vulnerable� as reported by the International Union for Conservation Nature and Natural Resources (IUCN). In-situ and ex-situ conservation of this spesies would yield better results when it�s genetic information and diversity d...

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Bibliographic Details
Main Authors: , PAMUNGKAS BAGUS SATRIYO, , Dr. drh. Rini Widayanti, MP.
Format: Thesis
Published: [Yogyakarta] : Universitas Gadjah Mada 2013
Subjects:
ETD
Description
Summary:Tarsius sp. is one of Indonesian endemic primate species which are �vulnerable� as reported by the International Union for Conservation Nature and Natural Resources (IUCN). In-situ and ex-situ conservation of this spesies would yield better results when it�s genetic information and diversity determined. The main object of this is to analyse genetic diversity study on ND6 encoding gene in T. bancanus from Borneo and Sumatera. The result of DNA isolation is used as a printing for the process of PCR amplification. The results of PCR process is sequenced using the primers ND6F and ND6R with temperature conditions predenaturation 94 0 C for 5 minutes, denaturation temperature is 94 0 C for 30 second, primer annealing temperature is 56 0 C for 45 second, elongation temperature 72 0 C for 1 minutes, ended with addition of (extention) 72 0 C for 5 minutes. The result of ND6 gene sequences is obtained 513 base nucleotide sequence after multiple aligned with other primates which are taken from Genbank. Results of analysis with program MEGA version 5.05 is obtained that are 4 different nucleotides and 1 different amino acid between T. bancanus from Borneo and Sumatera. The genetic distance based on nucleotides sequences of ND6 gene were analysed using the Kimura 2-parameter between T. bancanus from Kalimantan and T. bancanus from Sumatera was 0,4%. Filogram using neighbour joining method based on nucleotide and amino acid sequence of ND6 gene can distinguish T. bancanus from Sumatera and T. bancanus from Borneo with T. bancanus (Genbank) and T. syrichta (Genbank).