Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
We have incorporated a morphological approach using ossicles of sea cucumber (Echinodermata: Holothuroidea) and partial sequences of 16S ribosomal RNA (rRNA) gene and cytochrome c oxidase I (COI) gene in this study as addition to partial cytochrome b (cyt b) mitochondrial DNA (mtDNA) gene sequenc...
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Format: | Monograph |
Language: | English |
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Sea Cucumber (Echinodermata: Holothuroidea) Research Group
2010
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Online Access: | http://irep.iium.edu.my/12982/1/Sea_Cucumber_Database_History.pdf |
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author | Kamarudin, Kamarul Rahim |
author_facet | Kamarudin, Kamarul Rahim |
author_sort | Kamarudin, Kamarul Rahim |
collection | IIUM |
description | We have incorporated a morphological approach using ossicles of sea cucumber
(Echinodermata: Holothuroidea) and partial sequences of 16S ribosomal RNA (rRNA)
gene and cytochrome c oxidase I (COI) gene in this study as addition to partial
cytochrome b (cyt b) mitochondrial DNA (mtDNA) gene sequences for species
identification. Beside Holothuria species including Holothuria leucospilota, species from
other genera were also included in order to get a better view on the phylogenetic
relationship of Holothuria species. 27 partial sequences of 16S rRNA mtDNA gene
(Accession No.: FJ223854 � FJ223872) and COI mtDNA gene (Accession No.:
FJ223873 - FJ223880) have been registered with GenBank, National Center for
Biotechnology Information (NCBI), U.S. National Library of Medicine
(http://www.ncbi.nlm.nih.gov/) prior to publications. Sea Cucumber Database, Kulliyyah
of Science, International Islamic University Malaysia
( http://sea.cucumber.kos.iium.googlepages.com/) containing all results of this study �
the first online database on sea cucumber in Malaysia � has been developed and the
database can also be accessed worldwide from Malaysia Maritime Database
(http://marin-dbase.com/). |
first_indexed | 2024-03-05T22:46:36Z |
format | Monograph |
id | oai:generic.eprints.org:12982 |
institution | International Islamic University Malaysia |
language | English |
last_indexed | 2024-03-05T22:46:36Z |
publishDate | 2010 |
publisher | Sea Cucumber (Echinodermata: Holothuroidea) Research Group |
record_format | dspace |
spelling | oai:generic.eprints.org:129822013-09-25T01:29:32Z http://irep.iium.edu.my/12982/ Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene Kamarudin, Kamarul Rahim Q Science (General) We have incorporated a morphological approach using ossicles of sea cucumber (Echinodermata: Holothuroidea) and partial sequences of 16S ribosomal RNA (rRNA) gene and cytochrome c oxidase I (COI) gene in this study as addition to partial cytochrome b (cyt b) mitochondrial DNA (mtDNA) gene sequences for species identification. Beside Holothuria species including Holothuria leucospilota, species from other genera were also included in order to get a better view on the phylogenetic relationship of Holothuria species. 27 partial sequences of 16S rRNA mtDNA gene (Accession No.: FJ223854 � FJ223872) and COI mtDNA gene (Accession No.: FJ223873 - FJ223880) have been registered with GenBank, National Center for Biotechnology Information (NCBI), U.S. National Library of Medicine (http://www.ncbi.nlm.nih.gov/) prior to publications. Sea Cucumber Database, Kulliyyah of Science, International Islamic University Malaysia ( http://sea.cucumber.kos.iium.googlepages.com/) containing all results of this study � the first online database on sea cucumber in Malaysia � has been developed and the database can also be accessed worldwide from Malaysia Maritime Database (http://marin-dbase.com/). Sea Cucumber (Echinodermata: Holothuroidea) Research Group 2010-04-10 Monograph NonPeerReviewed application/pdf en http://irep.iium.edu.my/12982/1/Sea_Cucumber_Database_History.pdf Kamarudin, Kamarul Rahim (2010) Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene. Research Report. Sea Cucumber (Echinodermata: Holothuroidea) Research Group, Kuantan, Pahang. (Unpublished) |
spellingShingle | Q Science (General) Kamarudin, Kamarul Rahim Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene |
title | Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene |
title_full | Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene |
title_fullStr | Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene |
title_full_unstemmed | Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene |
title_short | Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene |
title_sort | systematics of a sea cucumbers of the genus holothuria aspidochirotida holothuroidea and phylogeography in h ieucospilota based on the cytochrome b gene |
topic | Q Science (General) |
url | http://irep.iium.edu.my/12982/1/Sea_Cucumber_Database_History.pdf |
work_keys_str_mv | AT kamarudinkamarulrahim systematicsofaseacucumbersofthegenusholothuriaaspidochirotidaholothuroideaandphylogeographyinhieucospilotabasedonthecytochromebgene |