Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene

We have incorporated a morphological approach using ossicles of sea cucumber (Echinodermata: Holothuroidea) and partial sequences of 16S ribosomal RNA (rRNA) gene and cytochrome c oxidase I (COI) gene in this study as addition to partial cytochrome b (cyt b) mitochondrial DNA (mtDNA) gene sequenc...

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Main Author: Kamarudin, Kamarul Rahim
Format: Monograph
Language:English
Published: Sea Cucumber (Echinodermata: Holothuroidea) Research Group 2010
Subjects:
Online Access:http://irep.iium.edu.my/12982/1/Sea_Cucumber_Database_History.pdf
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author Kamarudin, Kamarul Rahim
author_facet Kamarudin, Kamarul Rahim
author_sort Kamarudin, Kamarul Rahim
collection IIUM
description We have incorporated a morphological approach using ossicles of sea cucumber (Echinodermata: Holothuroidea) and partial sequences of 16S ribosomal RNA (rRNA) gene and cytochrome c oxidase I (COI) gene in this study as addition to partial cytochrome b (cyt b) mitochondrial DNA (mtDNA) gene sequences for species identification. Beside Holothuria species including Holothuria leucospilota, species from other genera were also included in order to get a better view on the phylogenetic relationship of Holothuria species. 27 partial sequences of 16S rRNA mtDNA gene (Accession No.: FJ223854 � FJ223872) and COI mtDNA gene (Accession No.: FJ223873 - FJ223880) have been registered with GenBank, National Center for Biotechnology Information (NCBI), U.S. National Library of Medicine (http://www.ncbi.nlm.nih.gov/) prior to publications. Sea Cucumber Database, Kulliyyah of Science, International Islamic University Malaysia ( http://sea.cucumber.kos.iium.googlepages.com/) containing all results of this study � the first online database on sea cucumber in Malaysia � has been developed and the database can also be accessed worldwide from Malaysia Maritime Database (http://marin-dbase.com/).
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spelling oai:generic.eprints.org:129822013-09-25T01:29:32Z http://irep.iium.edu.my/12982/ Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene Kamarudin, Kamarul Rahim Q Science (General) We have incorporated a morphological approach using ossicles of sea cucumber (Echinodermata: Holothuroidea) and partial sequences of 16S ribosomal RNA (rRNA) gene and cytochrome c oxidase I (COI) gene in this study as addition to partial cytochrome b (cyt b) mitochondrial DNA (mtDNA) gene sequences for species identification. Beside Holothuria species including Holothuria leucospilota, species from other genera were also included in order to get a better view on the phylogenetic relationship of Holothuria species. 27 partial sequences of 16S rRNA mtDNA gene (Accession No.: FJ223854 � FJ223872) and COI mtDNA gene (Accession No.: FJ223873 - FJ223880) have been registered with GenBank, National Center for Biotechnology Information (NCBI), U.S. National Library of Medicine (http://www.ncbi.nlm.nih.gov/) prior to publications. Sea Cucumber Database, Kulliyyah of Science, International Islamic University Malaysia ( http://sea.cucumber.kos.iium.googlepages.com/) containing all results of this study � the first online database on sea cucumber in Malaysia � has been developed and the database can also be accessed worldwide from Malaysia Maritime Database (http://marin-dbase.com/). Sea Cucumber (Echinodermata: Holothuroidea) Research Group 2010-04-10 Monograph NonPeerReviewed application/pdf en http://irep.iium.edu.my/12982/1/Sea_Cucumber_Database_History.pdf Kamarudin, Kamarul Rahim (2010) Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene. Research Report. Sea Cucumber (Echinodermata: Holothuroidea) Research Group, Kuantan, Pahang. (Unpublished)
spellingShingle Q Science (General)
Kamarudin, Kamarul Rahim
Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
title Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
title_full Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
title_fullStr Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
title_full_unstemmed Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
title_short Systematics of a Sea cucumbers of the Genus Holothuria (Aspidochirotida: Holothuroidea)and Phylogeography in H. Ieucospilota based on the Cytochrome-b Gene
title_sort systematics of a sea cucumbers of the genus holothuria aspidochirotida holothuroidea and phylogeography in h ieucospilota based on the cytochrome b gene
topic Q Science (General)
url http://irep.iium.edu.my/12982/1/Sea_Cucumber_Database_History.pdf
work_keys_str_mv AT kamarudinkamarulrahim systematicsofaseacucumbersofthegenusholothuriaaspidochirotidaholothuroideaandphylogeographyinhieucospilotabasedonthecytochromebgene